RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ANKHD1Q8IWZ3 2542 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 PFN2P35080 140 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 RHOHQ15669 191 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 I3L2K1 104 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 PIP4P1Q86T03 277 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 TP73-AS1Q9UF72 201 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 TRAV13-2A0A0B4J235 113 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 SRSF2Q01130 221 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 GDF5OSQ5U4N7 250 aa12.37□□□□□ -0.43
RBFOX1-212ENST00000550418 TNRC6AQ8NDV7 1962 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 RPL39LQ96EH5 51 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 CEP295Q9C0D2 2601 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 TRAV12-2A0A075B6T6 113 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 TRAV12-1A0A0B4J245 112 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 RS1O15537 224 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 GNRH2O43555 120 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 PLXNB1O43157 2135 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 IGHV3-16A0A0C4DH30 117 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 K7EIM0 57 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 BAALC-AS2P0C853 105 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 HAMPP81172 84 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 SP5Q6BEB4 398 aaPredicted RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 MRPL53Q96EL3 112 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 RANBP2P49792 3224 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 PCNX3Q9H6A9 2034 aa12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 MKI67P46013 3256 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-212ENST00000550418 LHBP01229 141 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 IGHV3-38A0A0C4DH36 116 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 SPRY2O43597 315 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 PTH2Q96A98 100 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 TLN1Q9Y490 2541 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 E9PLD3 99 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 RNASE13Q5GAN3 156 aaKnown RBP12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 CSPG4Q6UVK1 2322 aa12.35□□□□□ -0.43
RBFOX1-212ENST00000550418 CRIP3Q6Q6R5 217 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 SS18Q15532 418 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 MRPL36Q9P0J6 103 aaKnown RBP12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 CMC4P56277 68 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 LOXL1Q08397 574 aaPredicted RBP12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 INS-IGF2F8WCM5 200 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 TCTEX1D4Q5JR98 221 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
RBFOX1-212ENST00000550418 HERVK_113P63121 156 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 COL4A4P53420 1690 aaPredicted RBP12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 FAM236AA0A1B0GUQ0 79 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 FAM236BA0A1B0GV22 79 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 TINCRA0A1B0GVN0 87 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 CTSZQ9UBR2 303 aa12.33□□□□□ -0.44
RBFOX1-212ENST00000550418 DSCR9P59020 149 aa12.32□□□□□ -0.44
RBFOX1-212ENST00000550418 SPRNQ5BIV9 151 aa12.32□□□□□ -0.44
RBFOX1-212ENST00000550418 MBD6Q96DN6 1003 aa12.32□□□□□ -0.44
RBFOX1-212ENST00000550418 TRBV6-1A0A0K0K1D8 114 aa12.32□□□□□ -0.44
RBFOX1-212ENST00000550418 F6UB75 175 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 RNF183Q96D59 192 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 PRO3102Q9H379 93 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 ZFP2Q6ZN57 461 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 A0A0J9YXV3 536 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 Q6ZUT4 128 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 ADAMTS9Q9P2N4 1935 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 RBMY1FQ15415 496 aaKnown RBP12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 PRR30Q53SZ7 412 aaPredicted RBP12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 DSCAML1Q8TD84 2053 aa12.31□□□□□ -0.44
RBFOX1-212ENST00000550418 WT1P19544 449 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 BRWD1-AS2P59051 145 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 BRCA2P51587 3418 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 B4DSR2 109 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 E7EUB6 86 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 RITA1Q96K30 269 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 Q9H8V8 135 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 HTTP42858 3142 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 RUSC1-AS1Q66K80 236 aa12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 SPANXB1Q9NS25 103 aaPredicted RBP12.3□□□□□ -0.44
RBFOX1-212ENST00000550418 BAALCQ8WXS3 180 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 MYO18BQ8IUG5 2567 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 PROP1O75360 226 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 TMEM243Q9BU79 118 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 IGHV7-4-1A0A0J9YVY3 117 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 TRBV10-2A0A0K0K1G8 114 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 FAM215AQ9Y5M1 114 aa12.29□□□□□ -0.44
RBFOX1-212ENST00000550418 MLST8Q9BVC4 326 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 ATOX1O00244 68 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 TOMM6Q96B49 74 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 IGLV11-55A0A075B6I3 123 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 CRLF1O75462 422 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 NXPH4O95158 308 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 CTSGP08311 255 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 NACAE9PAV3 2078 aa12.28□□□□□ -0.44
RBFOX1-212ENST00000550418 J3KT08 172 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms