RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 TWIST1Q15672 202 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 OR10J3Q5JRS4 329 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 SPANXN1Q5VSR9 72 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 MORN3Q6PF18 240 aaPredicted RBP3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 C12orf54Q6X4T0 127 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 ADAMTSL5Q6ZMM2 481 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 TMEM256Q8N2U0 113 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 C3orf56Q8N813 242 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 GATD1Q8NB37 220 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 GTSF1Q8WW33 167 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 AP1S3Q96PC3 154 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 C1QTNF4Q9BXJ3 329 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 CNFNQ9BYD5 112 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 PHLDA3Q9Y5J5 127 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 NSD1Q96L73 2696 aaPredicted RBP3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 PLXNB1O43157 2135 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 MYO9AB2RTY4 2548 aa3.71□□□□□ -1.82
AC078880.2-201ENST00000547948 NOTCH2Q04721 2471 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 SNAI2O43623 268 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BKO60814 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 IGKV3-20P01619 116 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BJP06899 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 ARMS2P0C7Q2 107 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 IGLC6P0CF74 106 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 SMIM17P0DL12 118 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 GZMBP10144 247 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BOP23527 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BBP33778 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BDP58876 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BCP62807 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 FOXI1Q12951 378 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST2H2BEQ16778 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 SPINK13Q1W4C9 94 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 ODF3L2Q3SX64 289 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 TDRG1Q3Y452 100 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 GDF5OSQ5U4N7 250 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 GFI1BQ5VTD9 330 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 LYZL1Q6UWQ5 148 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 BAGE3Q86Y29 109 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 LINC00476Q8WZB0 136 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BHQ93079 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BNQ99877 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST1H2BMQ99879 126 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 TMEM208Q9BTX3 173 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 ZNF256Q9Y2P7 627 aaPredicted RBP3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 LAMTOR2Q9Y2Q5 125 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 GOLT1BQ9Y3E0 138 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 SELENOKQ9Y6D0 94 aa3.7□□□□□ -1.82
AC078880.2-201ENST00000547948 CUBNO60494 3623 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 IGHV1OR15-1A0A075B7D0 117 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 TRAV12-3A0A0B4J271 114 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 GRIFINA4D1Z8 144 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 CBY3A6NI87 242 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 KNCNA6PVL3 124 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 H3BVH4 76 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 M0R2Z0 102 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 UBE2CO00762 179 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 PPP1R17O96001 155 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 PPBPP02775 128 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 CD7P09564 240 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 PRB4P10163 310 aaPredicted RBP3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 SRIP30626 198 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 NDUFA6P56556 154 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 KRTAP10-3P60369 221 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 ANXA2RQ3ZCQ2 193 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 MUC21Q5SSG8 566 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 DNLZQ5SXM8 178 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 PRR9Q5T870 116 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 ZNF493Q6ZR52 646 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 ORMDL3Q8N138 153 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 TMEM18Q96B42 140 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 LINC00467Q9BRT7 94 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 NDUFAF3Q9BU61 184 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 TMEM191AQ9H0A3 160 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 CSPG4Q6UVK1 2322 aa3.69□□□□□ -1.82
AC078880.2-201ENST00000547948 HIVEP1P15822 2718 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 IGHV4-4A0A075B6R2 117 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 TRAV12-2A0A075B6T6 113 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 LOC102724200A0A096LPH7 203 aaPredicted RBP3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 A0A0A0MQY5 61 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 C5orf52A6NGY3 159 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 A8MZ25 164 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 M0R381 172 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 RAB4AP20338 218 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 NTF3P20783 257 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 CKS2P33552 79 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 AKR1D1P51857 326 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 DEFB1P60022 68 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 SNRPEP62304 92 aaKnown RBP3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 Q0VG73 95 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 SLAQ13239 276 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 KRTAP24-1Q3LI83 254 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 SERTAD4-AS1Q5TG53 156 aa3.68□□□□□ -1.82
AC078880.2-201ENST00000547948 HIST2H2BDQ6DRA6 164 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms