RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 VPS13CQ709C8 3753 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 IGHV4OR15-8A0A075B7B6 117 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 A0A087WW49 117 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 A0A0J9YX75 114 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 C7orf71A4D174 169 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 SNRPD3P62318 126 aaKnown RBP13.24□□□□□ -0.29
SCARB1-208ENST00000544327 VAMP3Q15836 100 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 RPL39LQ96EH5 51 aaKnown RBP13.24□□□□□ -0.29
SCARB1-208ENST00000544327 UBE2E2Q96LR5 201 aa13.24□□□□□ -0.29
SCARB1-208ENST00000544327 A6NDN8 102 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-208ENST00000544327 MGPP08493 103 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 PLNP26678 52 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 LRRC75A-AS1Q8N1F1 130 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 BBC3Q96PG8 261 aaPredicted RBP13.23□□□□□ -0.29
SCARB1-208ENST00000544327 MRPL35Q9NZE8 188 aaKnown RBP13.23□□□□□ -0.29
SCARB1-208ENST00000544327 SELENOKQ9Y6D0 94 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 IGKV2D-26A0A0A0MRZ7 120 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 MAPK1IP1LQ8NDC0 245 aa13.23□□□□□ -0.29
SCARB1-208ENST00000544327 USP9XQ93008 2570 aaPredicted RBP13.22□□□□□ -0.29
SCARB1-208ENST00000544327 H3BRM9 83 aa13.22□□□□□ -0.29
SCARB1-208ENST00000544327 ZNF688P0C7X2 276 aa13.22□□□□□ -0.29
SCARB1-208ENST00000544327 ZC2HC1BQ5TFG8 222 aa13.22□□□□□ -0.29
SCARB1-208ENST00000544327 ZNF843Q8N446 348 aa13.22□□□□□ -0.29
SCARB1-208ENST00000544327 C9orf85Q96MD7 179 aa13.22□□□□□ -0.29
SCARB1-208ENST00000544327 TCTAP57738 103 aa13.21□□□□□ -0.29
SCARB1-208ENST00000544327 COL12A1Q99715 3063 aa13.21□□□□□ -0.29
SCARB1-208ENST00000544327 F8VRH5 84 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 H7C1H1 209 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 SYNJ2BPP57105 145 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 Q8N2B8 174 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 TMEM160Q9NX00 188 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 CELSR1Q9NYQ6 3014 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 TRAV12-3A0A0B4J271 114 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 DUSP14O95147 198 aaKnown RBP13.2□□□□□ -0.3
SCARB1-208ENST00000544327 DEFB113Q30KQ7 82 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 GTSCR1Q86UQ5 136 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 SCGB3A1Q96QR1 104 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 CR1P17927 2039 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 MUC4Q99102 2169 aa13.2□□□□□ -0.3
SCARB1-208ENST00000544327 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
SCARB1-208ENST00000544327 CD7P09564 240 aa13.19□□□□□ -0.3
SCARB1-208ENST00000544327 HOXD3P31249 432 aaPredicted RBP13.19□□□□□ -0.3
SCARB1-208ENST00000544327 NEXN-AS1Q8NBZ9 246 aa13.19□□□□□ -0.3
SCARB1-208ENST00000544327 LINC01549A6NIU2 74 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 K7EP13 123 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
SCARB1-208ENST00000544327 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 CSTL1Q9H114 145 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 CDKN1BP46527 198 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 C2orf66Q6UXQ4 117 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 OR4C5Q8NGB2 326 aa13.18□□□□□ -0.3
SCARB1-208ENST00000544327 TRAV8-6A0A0B4J262 113 aa13.17□□□□□ -0.3
SCARB1-208ENST00000544327 C9orf118A6NHY6 69 aa13.17□□□□□ -0.3
SCARB1-208ENST00000544327 POLR2KP53803 58 aaKnown RBP13.17□□□□□ -0.3
SCARB1-208ENST00000544327 KRTAP10-9P60411 292 aa13.17□□□□□ -0.3
SCARB1-208ENST00000544327 AMMECR1LQ6DCA0 310 aa13.17□□□□□ -0.3
SCARB1-208ENST00000544327 PRRC2AP48634 2157 aaKnown RBP13.16□□□□□ -0.3
SCARB1-208ENST00000544327 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 Q5PR19 223 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 SUMO4Q6EEV6 95 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 ERASQ7Z444 233 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 CHTOPQ9Y3Y2 248 aaKnown RBP13.16□□□□□ -0.3
SCARB1-208ENST00000544327 FLNCQ14315 2725 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 TRBV25-1A0A075B6N4 114 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 BAALCQ8WXS3 180 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 CHAC1Q9BUX1 264 aa13.16□□□□□ -0.3
SCARB1-208ENST00000544327 IGHV1OR15-1A0A075B7D0 117 aa13.15□□□□□ -0.3
SCARB1-208ENST00000544327 AMTNQ6UX39 209 aa13.15□□□□□ -0.3
SCARB1-208ENST00000544327 CBY1Q9Y3M2 126 aa13.15□□□□□ -0.3
SCARB1-208ENST00000544327 TRAV2A0A0B4J234 112 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 A8MTW9 85 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 SVIPQ8NHG7 77 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 TTTY13Q9BZ97 58 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 JPT2Q9H910 190 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
SCARB1-208ENST00000544327 VCYO14598 125 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 TAL2Q16559 108 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 TCTEX1D4Q5JR98 221 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 Q8N1Y9 231 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 MDFICQ9P1T7 246 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
SCARB1-208ENST00000544327 LINC01619G3V211 115 aa13.12□□□□□ -0.31
SCARB1-208ENST00000544327 RIPPLY3P57055 190 aa13.12□□□□□ -0.31
SCARB1-208ENST00000544327 SPINK13Q1W4C9 94 aa13.12□□□□□ -0.31
SCARB1-208ENST00000544327 MAPKAPK5-AS1Q8N8E1 139 aa13.12□□□□□ -0.31
SCARB1-208ENST00000544327 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
SCARB1-208ENST00000544327 A0A087WWL8 130 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 TRBV27A0A0K0K1C4 114 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 ZFP2Q6ZN57 461 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 DUX5Q96PT3 197 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 CELSR2Q9HCU4 2923 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 PRSS29PA6NIE9 313 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 IGIPA6NJ69 53 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 IGKV3-20P01619 116 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms