RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF876PQ49A33 203 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 C10orf91Q5T1B1 145 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 FAM222AQ5U5X8 452 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 SPANXN1Q5VSR9 72 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 NOP10Q9NPE3 64 aaKnown RBP5.71□□□□□ -1.5
SSBP3-211ENST00000528787 GSN-AS1Q9NRJ2 163 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 DKK2Q9UBU2 259 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
SSBP3-211ENST00000528787 A0A087WWC5 75 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 TRGV1A0A0A0MS02 117 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 NUPR2A6NF83 97 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 PGPEP1LA6NFU8 196 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 C9JQL5 133 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 H3BVH4 76 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 K7EN84 100 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 SNAI2O43623 268 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 SPINK4O60575 86 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 ARMS2P0C7Q2 107 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 PRB4P10163 310 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 CRIP1P50238 77 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 FOXA3P55318 350 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 RIGQ13278 110 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 COX19Q49B96 90 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 FRZBQ92765 325 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 C9orf85Q96MD7 179 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 AP1S3Q96PC3 154 aa5.7□□□□□ -1.5
SSBP3-211ENST00000528787 SSBP4Q9BWG4 385 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 RNASE7Q9H1E1 156 aaKnown RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 KLK5Q9Y337 293 aaPredicted RBP5.7□□□□□ -1.5
SSBP3-211ENST00000528787 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 IGHV4-4A0A075B6R2 117 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 TMSB15BA0A087X1C1 80 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 TRAV4A0A0B4J268 109 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 H7C1H1 209 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 GNRH2O43555 120 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 APOC3P02656 99 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 CTRLP40313 264 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 ZFP2Q6ZN57 461 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 SH2D6Q7Z4S9 175 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 ATP5L2Q7Z4Y8 100 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 OR4C5Q8NGB2 326 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 TPPP3Q9BW30 176 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 CNFNQ9BYD5 112 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 RETNQ9HD89 108 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 SCRT2Q9NQ03 307 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 MDFICQ9P1T7 246 aa5.69□□□□□ -1.5
SSBP3-211ENST00000528787 A0A1B0GUT8 65 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 SMIM27A0A1W2PRY6 76 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 GRIFINA4D1Z8 144 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 HIGD1CA8MV81 97 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 H3BNG1 76 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 ATP6V1G1O75348 118 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 PPP1R17O96001 155 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 IGLC6P0CF74 106 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 DEFB130BP0DP73 79 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 DEFB130AP0DP74 79 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 RNASE3P12724 160 aaKnown RBP5.68□□□□□ -1.5
SSBP3-211ENST00000528787 S100A1P23297 94 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 RNF212Q495C1 297 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 RASL11AQ6T310 242 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 CLRN3Q8NCR9 226 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 EDA2RQ9HAV5 297 aa5.68□□□□□ -1.5
SSBP3-211ENST00000528787 NBEAL2Q6ZNJ1 2754 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 M0R381 172 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 GAGE7O76087 117 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 NXPH4O95158 308 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 TWIST1Q15672 202 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 C15orf53Q8NAA6 179 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 PRADC1Q9BSG0 188 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 C11orf21Q9P2W6 132 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 V9GYV3 84 aa5.67□□□□□ -1.5
SSBP3-211ENST00000528787 DEFB131BA0A096LNP1 70 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 PLAC8L1A1L4L8 177 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 C7orf77A4D0Y5 90 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 RAB4BP61018 213 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 LYZL1Q6UWQ5 148 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 Q6ZTI0 123 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 DPH3P1Q9H4G8 78 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 PRO0255Q9UI72 69 aa5.66□□□□□ -1.5
SSBP3-211ENST00000528787 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 TRBV6-4A0A1B0GX49 114 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 F5H768 121 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 DEFB4AO15263 64 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 RS1O15537 224 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 ADCYAP1P18509 176 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 NTF3P20783 257 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 HBBP68871 147 aa5.65□□□□□ -1.5
SSBP3-211ENST00000528787 SLC7A5P1Q8MH63 180 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms