RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SUMO2P61956 95 aaKnown RBP13.15□□□□□ -0.3
USH1C-205ENST00000527020 WFDC12Q8WWY7 111 aa13.15□□□□□ -0.3
USH1C-205ENST00000527020 A1L4Q6 167 aa13.15□□□□□ -0.3
USH1C-205ENST00000527020 CBY3A6NI87 242 aa13.15□□□□□ -0.3
USH1C-205ENST00000527020 MYOZ3Q8TDC0 251 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 VPREB3Q9UKI3 123 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 C7orf71A4D174 169 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 DPM2O94777 84 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 SEC11AP67812 179 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 SAMD13Q5VXD3 122 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 POM121L12Q8N7R1 296 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 C20orf78Q9BR46 151 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 KIF25-AS1Q9Y6Z4 181 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 AGRNO00468 2067 aa13.14□□□□□ -0.31
USH1C-205ENST00000527020 MGPP08493 103 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 IGHV4-31P0DP07 118 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 LINC00315P59091 139 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 VAMP3Q15836 100 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 Q6YL49 198 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 AP1S3Q96PC3 154 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 ZNF702PQ9H963 129 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 MRPL35Q9NZE8 188 aaKnown RBP13.13□□□□□ -0.31
USH1C-205ENST00000527020 ZNF688P0C7X2 276 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 TTTY13Q9BZ97 58 aa13.13□□□□□ -0.31
USH1C-205ENST00000527020 HSD52Q0P140 79 aa13.12□□□□□ -0.31
USH1C-205ENST00000527020 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
USH1C-205ENST00000527020 PTPN13Q12923 2485 aa13.12□□□□□ -0.31
USH1C-205ENST00000527020 IGHV4OR15-8A0A075B7B6 117 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 A0A087WW49 117 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 A0A087WX48 190 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 TRAV12-3A0A0B4J271 114 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 K7EQG2 157 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 PSMG4Q5JS54 123 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 LGALS1P09382 135 aaKnown RBP13.11□□□□□ -0.31
USH1C-205ENST00000527020 SYNJ2BPP57105 145 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 ORMDL2Q53FV1 153 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 FAM159AQ6UWV7 190 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 TOMM6Q96B49 74 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 TEX15Q9BXT5 2789 aa13.11□□□□□ -0.31
USH1C-205ENST00000527020 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
USH1C-205ENST00000527020 TRAV8-6A0A0B4J262 113 aa13.1□□□□□ -0.31
USH1C-205ENST00000527020 A0A0J9YX75 114 aa13.1□□□□□ -0.31
USH1C-205ENST00000527020 JPT2Q9H910 190 aa13.1□□□□□ -0.31
USH1C-205ENST00000527020 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
USH1C-205ENST00000527020 ODF3Q96PU9 254 aa13.1□□□□□ -0.31
USH1C-205ENST00000527020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
USH1C-205ENST00000527020 ELANEP08246 267 aa13.09□□□□□ -0.31
USH1C-205ENST00000527020 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
USH1C-205ENST00000527020 LGALS9O00182 355 aa13.08□□□□□ -0.31
USH1C-205ENST00000527020 HOXA3O43365 443 aaPredicted RBP13.08□□□□□ -0.31
USH1C-205ENST00000527020 AMMECR1LQ6DCA0 310 aa13.08□□□□□ -0.31
USH1C-205ENST00000527020 ABCA12Q86UK0 2595 aa13.08□□□□□ -0.32
USH1C-205ENST00000527020 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
USH1C-205ENST00000527020 K7EMI3 77 aa13.08□□□□□ -0.32
USH1C-205ENST00000527020 CD7P09564 240 aa13.08□□□□□ -0.32
USH1C-205ENST00000527020 DUX5Q96PT3 197 aa13.08□□□□□ -0.32
USH1C-205ENST00000527020 SORL1Q92673 2214 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 TRAV12-2A0A075B6T6 113 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 HOXD3P31249 432 aaPredicted RBP13.07□□□□□ -0.32
USH1C-205ENST00000527020 RNF152Q8N8N0 203 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 UBE2E2Q96LR5 201 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 SCGB3A1Q96QR1 104 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 HIGD1BQ9P298 99 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 IGKV3-20P01619 116 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 SNRPD3P62318 126 aaKnown RBP13.07□□□□□ -0.32
USH1C-205ENST00000527020 CSTL1Q9H114 145 aa13.07□□□□□ -0.32
USH1C-205ENST00000527020 HLA-DRB4P13762 266 aa13.06□□□□□ -0.32
USH1C-205ENST00000527020 NEXN-AS1Q8NBZ9 246 aa13.06□□□□□ -0.32
USH1C-205ENST00000527020 OR4C5Q8NGB2 326 aa13.06□□□□□ -0.32
USH1C-205ENST00000527020 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
USH1C-205ENST00000527020 HLA-DRB4X5D2U9 266 aa13.06□□□□□ -0.32
USH1C-205ENST00000527020 IGHV3-16A0A0C4DH30 117 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 A6NDN8 102 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 H3BRM9 83 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 PPP1R17O96001 155 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 PLNP26678 52 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 NEGR1Q7Z3B1 354 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 TRBV25-1A0A075B6N4 114 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 F8VRH5 84 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 H7C1H1 209 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 FOSL1P15407 271 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 SUMO4Q6EEV6 95 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 MAPKAPK5-AS1Q8N8E1 139 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 MDFICQ9P1T7 246 aa13.05□□□□□ -0.32
USH1C-205ENST00000527020 A0A087WWL8 130 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 C18orf65Q6ZTR6 163 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 RPL32P62910 135 aaKnown RBP13.04□□□□□ -0.32
USH1C-205ENST00000527020 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 Q5PR19 223 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 CHAC1Q9BUX1 264 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 NAV2Q8IVL1 2488 aa13.04□□□□□ -0.32
USH1C-205ENST00000527020 K7EP13 123 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 POLR2KP53803 58 aaKnown RBP13.03□□□□□ -0.32
USH1C-205ENST00000527020 Q8N1Y9 231 aa13.03□□□□□ -0.32
USH1C-205ENST00000527020 BAALCQ8WXS3 180 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms