RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 IGHV3-16A0A0C4DH30 117 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 IGHV3-53P01767 116 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 MGPP08493 103 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 DEFB130BP0DP73 79 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 DEFB130AP0DP74 79 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 EVI2AP22794 236 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 ZNF415Q09FC8 603 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 RIGQ13278 110 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 TMEM256Q8N2U0 113 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 COLCA2A8K830 154 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 RAB5AP20339 215 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 HBBP68871 147 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 FABP9Q0Z7S8 132 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 C14orf178Q8N769 122 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-212ENST00000523483 GFRA4Q9GZZ7 299 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 KIR2DL5BA0A0G2JN68 375 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 KIR2DL5BA0A0G2JPC4 375 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 F5H697 171 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 DEFA6Q01524 100 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 SMIM15Q7Z3B0 74 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 KIR2DL5AQ8N109 375 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 CSNK1G2-AS1Q8NCQ2 148 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 KIR2DL5BQ8NHK3 375 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
SDCBP-212ENST00000523483 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 TDRG1Q3Y452 100 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 ZNF575Q86XF7 245 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 SBSPONQ8IVN8 264 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 TRAPPC1Q9Y5R8 145 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 STAB2Q8WWQ8 2551 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 MUC4Q99102 2169 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 TRGV2A0A075B6R0 118 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 F2Z2F3 143 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 GAGE7O76087 117 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 TRGC2P03986 189 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 SMIM17P0DL12 118 aa6.76□□□□□ -1.33
SDCBP-212ENST00000523483 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
SDCBP-212ENST00000523483 C20orf144Q9BQM9 153 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 Q6ZTI0 123 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 AMN1Q8IY45 258 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 TRBV24-1A0A075B6N3 115 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-212ENST00000523483 SYT8Q8NBV8 401 aa6.75□□□□□ -1.33
SDCBP-212ENST00000523483 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 CTRLP40313 264 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
SDCBP-212ENST00000523483 IGHV4-28A0A0C4DH34 117 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 NCR2O95944 276 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 HTN3P15516 51 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 ZNF56Q15929 161 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 RNASE8Q8TDE3 154 aaKnown RBP6.74□□□□□ -1.33
SDCBP-212ENST00000523483 TRAV26-2A0A0B4J265 109 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 SMKR1H3BMG3 65 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 DEFB104AQ8WTQ1 72 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 C16orf74Q96GX8 76 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 AP1S3Q96PC3 154 aa6.74□□□□□ -1.33
SDCBP-212ENST00000523483 SLAQ13239 276 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 Q6ZWC4 215 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 X6R8D5 127 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 M0R2P5 195 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 UBE2CO00762 179 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 APCSP02743 223 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 S100A8P05109 93 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 TRGC1P0CF51 173 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 RNF183Q96D59 192 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 YPEL4Q96NS1 127 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 MEGF8Q7Z7M0 2845 aa6.73□□□□□ -1.33
SDCBP-212ENST00000523483 SNAI2O43623 268 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 CACNG7P62955 275 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 FAM222AQ5U5X8 452 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 TMEM136Q6ZRR5 245 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 ATP5L2Q7Z4Y8 100 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 C9orf85Q96MD7 179 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 OVOL2Q9BRP0 275 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 TRAV9-1A0A075B6T8 112 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 HLA-DQA1P01909 254 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 OR4C5Q8NGB2 326 aa6.72□□□□□ -1.33
SDCBP-212ENST00000523483 A0A1B0GXF2 115 aa6.71□□□□□ -1.33
SDCBP-212ENST00000523483 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.33
SDCBP-212ENST00000523483 CKS2P33552 79 aa6.71□□□□□ -1.33
SDCBP-212ENST00000523483 GATA1P15976 413 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-212ENST00000523483 SRIP30626 198 aa6.71□□□□□ -1.34
SDCBP-212ENST00000523483 KPRPQ5T749 579 aaPredicted RBP6.71□□□□□ -1.34
SDCBP-212ENST00000523483 LOC389332A0A1B0GUA5 103 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 D6R8Y8 96 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 SPXQ9BT56 116 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 GNB1LQ9BYB4 327 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 ZMAT4Q9H898 229 aa6.7□□□□□ -1.34
SDCBP-212ENST00000523483 SCRT2Q9NQ03 307 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms