RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
TFF3-204ENST00000518498 HECTD4Q9Y4D8 3996 aa12.96□□□□□ -0.34
TFF3-204ENST00000518498 TRGV11A0A075B6L2 103 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 IGKV3D-20A0A0C4DH25 116 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 P0DMU3 169 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 C1orf158Q8N1D5 194 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 POM121L12Q8N7R1 296 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 TSKUQ8WUA8 353 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 IMMP2LQ96T52 175 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
TFF3-204ENST00000518498 A0A1B0GVY2 172 aa12.94□□□□□ -0.34
TFF3-204ENST00000518498 DNLZQ5SXM8 178 aa12.94□□□□□ -0.34
TFF3-204ENST00000518498 ZNF705AQ6ZN79 300 aaPredicted RBP12.94□□□□□ -0.34
TFF3-204ENST00000518498 IL36BQ9NZH7 164 aa12.94□□□□□ -0.34
TFF3-204ENST00000518498 CELA1Q9UNI1 258 aa12.94□□□□□ -0.34
TFF3-204ENST00000518498 A0A1W2PPQ1 181 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 SMIM9A6NGZ8 99 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 CBY3A6NI87 242 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 PRSS29PA6NIE9 313 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 MED14OSP0DP75 135 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 S100PP25815 95 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 ASIPP42127 132 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 RPL19P84098 196 aaKnown RBP12.93□□□□□ -0.34
TFF3-204ENST00000518498 KCNIP4Q6PIL6 250 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 Q6ZQT7 251 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 NDUFAF3Q9BU61 184 aa12.93□□□□□ -0.34
TFF3-204ENST00000518498 IGHV3OR16-12A0A075B7B8 117 aa12.92□□□□□ -0.34
TFF3-204ENST00000518498 TMSB15BA0A087X1C1 80 aa12.92□□□□□ -0.34
TFF3-204ENST00000518498 S100A4P26447 101 aaKnown RBP12.92□□□□□ -0.34
TFF3-204ENST00000518498 NEU1Q99519 415 aa12.92□□□□□ -0.34
TFF3-204ENST00000518498 SMIM27A0A1W2PRY6 76 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 M0R2N4 97 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 TYMSP04818 313 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 ATRAIDQ6UW56 229 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 ZNF493Q6ZR52 646 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 SMCO4Q9NRQ5 59 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 NAT8BQ9UHF3 227 aa12.91□□□□□ -0.34
TFF3-204ENST00000518498 KIAA1109Q2LD37 5005 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 PCLOQ9Y6V0 5065 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 F2Z2F3 143 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 HTN1P15515 57 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 FOXA3P55318 350 aaPredicted RBP12.9□□□□□ -0.34
TFF3-204ENST00000518498 ZNF415Q09FC8 603 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 RRN3P1Q2M238 152 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 FER1L6-AS1Q8NA97 138 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 BTF3L4Q96K17 158 aa12.9□□□□□ -0.34
TFF3-204ENST00000518498 TRAV9-1A0A075B6T8 112 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 GRIFINA4D1Z8 144 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 RTL8CO15255 209 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 GNRH2O43555 120 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 TMEM263Q8WUH6 116 aaKnown RBP12.89□□□□□ -0.35
TFF3-204ENST00000518498 BORCS7Q96B45 105 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
TFF3-204ENST00000518498 IGHV3-16A0A0C4DH30 117 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 HIGD1CA8MV81 97 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 OR5AL1P0C617 328 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 GZMBP10144 247 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 LGALS9BQ3B8N2 356 aa12.88□□□□□ -0.35
TFF3-204ENST00000518498 SNAI2O43623 268 aa12.87□□□□□ -0.35
TFF3-204ENST00000518498 WDR73Q6P4I2 378 aa12.87□□□□□ -0.35
TFF3-204ENST00000518498 SPXQ9BT56 116 aa12.87□□□□□ -0.35
TFF3-204ENST00000518498 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
TFF3-204ENST00000518498 DNAH6Q9C0G6 4158 aa12.87□□□□□ -0.35
TFF3-204ENST00000518498 H3BVH4 76 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 ARMS2P0C7Q2 107 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 CTRLP40313 264 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 TCL1AP56279 114 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 CACNG7P62955 275 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 ZNF575Q86XF7 245 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 GTSF1Q8WW33 167 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 TPPP3Q9BW30 176 aa12.86□□□□□ -0.35
TFF3-204ENST00000518498 SNURFLB1AK76 121 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 RNASE3P12724 160 aaKnown RBP12.85□□□□□ -0.35
TFF3-204ENST00000518498 EMP1P54849 157 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 LYZL1Q6UWQ5 148 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 RNASE8Q8TDE3 154 aaKnown RBP12.85□□□□□ -0.35
TFF3-204ENST00000518498 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 C9orf85Q96MD7 179 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 SCRT2Q9NQ03 307 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 PHLDA3Q9Y5J5 127 aa12.85□□□□□ -0.35
TFF3-204ENST00000518498 A0A1B0GUT8 65 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 FAM3BP58499 235 aaPredicted RBP12.84□□□□□ -0.35
TFF3-204ENST00000518498 RIGQ13278 110 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 C11orf72Q8NBR9 251 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 FAM210BQ96KR6 192 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 CNFNQ9BYD5 112 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 URGCP-MRPS24S4R325 110 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 MUC4Q99102 2169 aa12.84□□□□□ -0.35
TFF3-204ENST00000518498 A0A1B0GW15 77 aa12.83□□□□□ -0.36
TFF3-204ENST00000518498 S100A8P05109 93 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms