RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 IGHV3OR16-13A0A075B7E8 117 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 IGHV3-74A0A0B4J1X5 117 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 PSMB8P28062 276 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 HSD52Q0P140 79 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 OR4C5Q8NGB2 326 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 LINC00477Q96M19 166 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 C16orf95Q9H693 158 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 ZMAT4Q9H898 229 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 SMPXQ9UHP9 88 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 CBY1Q9Y3M2 126 aa12.14□□□□□ -0.47
SQSTM1-213ENST00000510187 IGHV3-49A0A0A0MS15 119 aa12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 OVOL1O14753 267 aa12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 ATP5LO75964 103 aa12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 FXYD7P58549 80 aa12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 PEF1Q9UBV8 284 aaKnown RBP12.13□□□□□ -0.47
SQSTM1-213ENST00000510187 NF1P21359 2839 aa12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 NDUFA7O95182 113 aa12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 FOXE3Q13461 319 aa12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 LINC01006Q8NI28 216 aa12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 MRAP2Q96G30 205 aa12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 TEP1Q99973 2627 aaKnown RBP12.12□□□□□ -0.47
SQSTM1-213ENST00000510187 A6NDN8 102 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 ELANEP08246 267 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 EVI2AP22794 236 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 ODF1Q14990 250 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 NRACQ8N912 160 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 A0A0G2JLM5 398 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 SOCS3O14543 225 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 MED14OSP0DP75 135 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 KIR3DS1Q14943 382 aa12.11□□□□□ -0.47
SQSTM1-213ENST00000510187 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 IGHV3-11P01762 117 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 SPANXN1Q5VSR9 72 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 TMEM158Q8WZ71 300 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 C20orf173Q96LM9 149 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 DKK2Q9UBU2 259 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
SQSTM1-213ENST00000510187 TRAV21A0A0B4J279 112 aa12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 C7orf71A4D174 169 aa12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 GATA1P15976 413 aaPredicted RBP12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 LAGE3Q14657 143 aa12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 ADAMTSL5Q6ZMM2 481 aa12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 RNF152Q8N8N0 203 aa12.09□□□□□ -0.47
SQSTM1-213ENST00000510187 CBY3A6NI87 242 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 H3BRM9 83 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 GPHB5Q86YW7 130 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 C18orf15Q96N68 181 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.47
SQSTM1-213ENST00000510187 IGKCP01834 107 aa12.08□□□□□ -0.48
SQSTM1-213ENST00000510187 PRSS1P07477 247 aa12.08□□□□□ -0.48
SQSTM1-213ENST00000510187 PRR9Q5T870 116 aa12.08□□□□□ -0.48
SQSTM1-213ENST00000510187 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
SQSTM1-213ENST00000510187 H3BVH4 76 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 DPM2O94777 84 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 SMIM17P0DL12 118 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 NMUP48645 174 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 UNQ9165/PRO28630Q6UXU0 137 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 WFDC3Q8IUB2 231 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 APRG1Q8IVJ8 170 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 MYOZ3Q8TDC0 251 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 FAM19A4Q96LR4 140 aa12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 NIPBLQ6KC79 2804 aaeCLIP12.07□□□□□ -0.48
SQSTM1-213ENST00000510187 K7EMI3 77 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 C2CD3Q4AC94 2353 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 TRBV12-3P01733 135 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 TCTEX1D4Q5JR98 221 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 SAMD13Q5VXD3 122 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 UBE2E2Q96LR5 201 aa12.06□□□□□ -0.48
SQSTM1-213ENST00000510187 C9orf118A6NHY6 69 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 ASIPP42127 132 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 PROK1P58294 105 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 KHDC1LQ5JSQ8 128 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 PCP2Q8IVA1 136 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 C20orf78Q9BR46 151 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 SMIM2Q9BVW6 85 aa12.05□□□□□ -0.48
SQSTM1-213ENST00000510187 TRAV8-6A0A0B4J262 113 aa12.04□□□□□ -0.48
SQSTM1-213ENST00000510187 M0R381 172 aa12.04□□□□□ -0.48
SQSTM1-213ENST00000510187 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.04□□□□□ -0.48
SQSTM1-213ENST00000510187 C11orf44Q8N8P7 122 aa12.04□□□□□ -0.48
SQSTM1-213ENST00000510187 RNASE8Q8TDE3 154 aaKnown RBP12.04□□□□□ -0.48
SQSTM1-213ENST00000510187 TRAV26-2A0A0B4J265 109 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 DPH3P1Q9H4G8 78 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 SETD2Q9BYW2 2564 aaPredicted RBP12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 A0A087WX48 190 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 TRAV12-1A0A0B4J245 112 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 LGALS1P09382 135 aaKnown RBP12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 CD28P10747 220 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 HIST2H2BDQ6DRA6 164 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 Q6ZQT7 251 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 ERASQ7Z444 233 aa12.03□□□□□ -0.48
SQSTM1-213ENST00000510187 AP1S3Q96PC3 154 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms