RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 SAMD13Q5VXD3 122 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 Q6Q795 121 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 Q6ZRN7 208 aaPredicted RBP1.54□□□□□ -2.16
PTPRK-215ENST00000498284 RPP25LQ8N5L8 163 aaKnown RBP1.54□□□□□ -2.16
PTPRK-215ENST00000498284 LINC00301Q8NCQ3 95 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 ZNF439Q8NDP4 499 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 PLPP5Q8NEB5 264 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 STAG3L4Q8TBR4 150 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 MAFIPQ8WZ33 124 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 HIST1H2BHQ93079 126 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 ADAT3Q96EY9 351 aaPredicted RBP1.54□□□□□ -2.16
PTPRK-215ENST00000498284 HIST1H2BNQ99877 126 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 HIST1H2BMQ99879 126 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 SNRNP25Q9BV90 132 aaKnown RBP1.54□□□□□ -2.16
PTPRK-215ENST00000498284 COMMD5Q9GZQ3 224 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 CCDC90BQ9GZT6 254 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 CHST6Q9GZX3 395 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 CST9LQ9H4G1 147 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 TVP23BQ9NYZ1 205 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 OR52A1Q9UKL2 312 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 SSR3Q9UNL2 185 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 ERGIC3Q9Y282 383 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 FRAS1Q86XX4 4008 aa1.54□□□□□ -2.16
PTPRK-215ENST00000498284 HECTD4Q9Y4D8 3996 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 TRAV9-1A0A075B6T8 112 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 UQCRHLA0A096LP55 91 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 H0YGG7 62 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 J3QRK9 145 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 KPNA4O00629 521 aaPredicted RBP1.53□□□□□ -2.16
PTPRK-215ENST00000498284 MSMBP08118 114 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 SCGB1A1P11684 91 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 CMPK1P30085 196 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 POLR2HP52434 150 aaKnown RBP1.53□□□□□ -2.16
PTPRK-215ENST00000498284 EFNA4P52798 201 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 CCL20P78556 96 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 SMCO1Q147U7 214 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 LCA10Q71F78 164 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 LRRC18Q8N456 261 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 TERB2Q8NHR7 220 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 ZNF563Q8TA94 476 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 NAT14Q8WUY8 206 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 C11orf40Q8WZ69 217 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 TSLPQ969D9 159 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 BORCS5Q969J3 196 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 PLEKHB2Q96CS7 222 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 MCEEQ96PE7 176 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 GPER1Q99527 375 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 PBDC1Q9BVG4 233 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 C20orf27Q9GZN8 174 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 DNAH9Q9NYC9 4486 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 JPT1Q9UK76 154 aa1.53□□□□□ -2.16
PTPRK-215ENST00000498284 ABCA13Q86UQ4 5058 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 LCE6AA0A183 80 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 ODAMA1E959 279 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 NAPSAO96009 420 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 SHBGP04278 402 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 PRM2P04554 102 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 TRGC1P0CF51 173 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 RPS4Y1P22090 263 aaKnown RBP1.52□□□□□ -2.17
PTPRK-215ENST00000498284 EVX1P49640 407 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 OR8B8Q15620 311 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 LINC01554Q52M75 96 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 NCMAPQ5T1S8 102 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 CLVS1Q8IUQ0 354 aaPredicted RBP1.52□□□□□ -2.17
PTPRK-215ENST00000498284 OR13C4Q8NGS5 318 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 THEM6Q8WUY1 208 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 GPX7Q96SL4 187 aaPredicted RBP1.52□□□□□ -2.17
PTPRK-215ENST00000498284 BPESC1Q9GZL8 116 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 CBLN4Q9NTU7 201 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 MUC4Q99102 2169 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 UBR4Q5T4S7 5183 aa1.52□□□□□ -2.17
PTPRK-215ENST00000498284 KIAA1109Q2LD37 5005 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 RIIAD1A6NNX1 92 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 B4DSR2 109 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 TMEM256-PLSCR3K7ERE1 68 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 M0R378 163 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 SLC22A1O15245 554 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 NDUFA2O43678 99 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 CST8O60676 142 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 NDUFC2O95298 119 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 C1QAP02745 245 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 FKBP2P26885 142 aaKnown RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 RNASE4P34096 147 aaKnown RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 EIF2B2P49770 351 aaKnown RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 SUPT4H1P63272 117 aaKnown RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 CCDC153Q494R4 210 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 FAM27BQ5VT28 67 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 TOMM20LQ6UXN7 152 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 ANGPTL5Q86XS5 388 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 BPIFA4PQ86YQ2 179 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 OR8J3Q8NGG0 315 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 SLAMF6Q96DU3 332 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 AIF1LQ9BQI0 150 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 MRPL32Q9BYC8 188 aaKnown RBP1.51□□□□□ -2.17
PTPRK-215ENST00000498284 TMEM133Q9H2Q1 129 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 MED11Q9P086 117 aa1.51□□□□□ -2.17
PTPRK-215ENST00000498284 TRAPPC2LQ9UL33 140 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms