RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 TRBV10-1A0A0K0K1A3 114 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 RBP4P02753 201 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 IGLC6P0CF74 106 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 ATP6V0E2Q8NHE4 81 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 LZICQ8WZA0 190 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 ANP32BQ92688 251 aaKnown RBP0.47□□□□□ -2.33
CLK1-213ENST00000492793 SMIM3Q9BZL3 60 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 TAS2R8Q9NYW2 309 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 NOP16Q9Y3C1 178 aaKnown RBP0.47□□□□□ -2.33
CLK1-213ENST00000492793 FRAS1Q86XX4 4008 aa0.47□□□□□ -2.33
CLK1-213ENST00000492793 KDM5CP41229 1560 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 FAM236AA0A1B0GUQ0 79 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 FAM236BA0A1B0GV22 79 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 M0R2P5 195 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 MPC1LP0DKB6 136 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 LINC00694P0DN24 101 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 NCS1P62166 190 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 ATP11AUNQ6ZP68 121 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 MMGT1Q8N4V1 131 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 PPDPFLQ8WWR9 84 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 ABCA4P78363 2273 aa0.46□□□□□ -2.34
CLK1-213ENST00000492793 TRBV20-1A0A075B6N2 111 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 TRAV2A0A0B4J234 112 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 YPEL1O60688 119 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 TSPAN19P0C672 248 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 SLC25A6P12236 298 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 DYNLRB2Q8TF09 96 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 CDK5RAP2Q96SN8 1893 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 OVOS2A0A0J9YW53 1432 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 OVOS2Q6IE36 1432 aa0.45□□□□□ -2.34
CLK1-213ENST00000492793 RREB1Q92766 1687 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 UHRF1BP1LA0JNW5 1464 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 M0R129 80 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 M0R2Z0 102 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 SMIM21Q3B7S5 101 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 DISP2A7MBM2 1401 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 CASZ1Q86V15 1759 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 ABCA1O95477 2261 aa0.44□□□□□ -2.34
CLK1-213ENST00000492793 MUC5BQ9HC84 5762 aaPredicted RBP0.43□□□□□ -2.34
CLK1-213ENST00000492793 CCDC171Q6TFL3 1326 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 ERCC6Q03468 1493 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 CDK12Q9NYV4 1490 aaPredicted RBP0.43□□□□□ -2.34
CLK1-213ENST00000492793 J3QLW9 94 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 J3QR89 54 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 RPL37P61927 97 aaKnown RBP0.43□□□□□ -2.34
CLK1-213ENST00000492793 KLKP1Q107X0 134 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 CTAGE3PQ8IX95 158 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 TSTD1Q8NFU3 115 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 VPS25Q9BRG1 176 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 COPZ2Q9P299 210 aa0.43□□□□□ -2.34
CLK1-213ENST00000492793 DLEC1Q9Y238 1755 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 FHAD1B1AJZ9 1412 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 TEX49A0A1B0GTD5 131 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 PITX3O75364 302 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 APOC1P02654 83 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 SMCO1Q147U7 214 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 MIC13Q5XKP0 118 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 OR2T2Q6IF00 324 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 SPINK6Q6UWN8 80 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 IFI27L1Q96BM0 104 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 SAR1AQ9NR31 198 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 TMEM14BQ9NUH8 114 aa0.42□□□□□ -2.34
CLK1-213ENST00000492793 CEP152O94986 1710 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 BLMP54132 1417 aaPredicted RBP0.41□□□□□ -2.34
CLK1-213ENST00000492793 PRG4Q92954 1404 aaPredicted RBP0.41□□□□□ -2.34
CLK1-213ENST00000492793 A0A096LNT2 108 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 K7ERU9 68 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 KRTAP2-3P0C7H8 128 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 ELOF1P60002 83 aaKnown RBP0.41□□□□□ -2.34
CLK1-213ENST00000492793 LINC01545Q5VT33 79 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 TMEM141Q96I45 108 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 KRTAP2-4Q9BYR9 128 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 KRTAP2-1Q9BYU5 128 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 PTPRMP28827 1452 aa0.41□□□□□ -2.34
CLK1-213ENST00000492793 MYH13Q9UKX3 1938 aa0.4□□□□□ -2.34
CLK1-213ENST00000492793 PLXNA2O75051 1894 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 CCDC179H3BU77 68 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 NPFFO15130 113 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 NCR2O95944 276 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 PYYP10082 97 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 COX4I1P13073 169 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 NPC2P61916 151 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 RPS25P62851 125 aaKnown RBP0.4□□□□□ -2.35
CLK1-213ENST00000492793 NDUFA11Q86Y39 141 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 BET1LQ9NYM9 111 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 NDUFA12Q9UI09 145 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 ERG28Q9UKR5 140 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 MED13LQ71F56 2210 aa0.4□□□□□ -2.35
CLK1-213ENST00000492793 TCRBV3S1A0A5B6 114 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 ZNF670-ZNF695F2Z2N8 137 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 EMX2Q04743 252 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 VSTM2AQ8TAG5 236 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 COA4Q9NYJ1 87 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 MDN1Q9NU22 5596 aa0.39□□□□□ -2.35
CLK1-213ENST00000492793 SOGA1O94964 1423 aa0.38□□□□□ -2.35
CLK1-213ENST00000492793 TRAV12-2A0A075B6T6 113 aa0.38□□□□□ -2.35
CLK1-213ENST00000492793 PIRTP0C851 137 aa0.38□□□□□ -2.35
CLK1-213ENST00000492793 COPZ1P61923 177 aa0.38□□□□□ -2.35
CLK1-213ENST00000492793 SPCS2Q15005 226 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms