RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 BUB3O43684 328 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 ERCC8Q13216 396 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 IFI27L1Q96BM0 104 aa17.2■□□□□ 0.34
USF3-203ENST00000491165 IGHV4OR15-8A0A075B7B6 117 aa17.19■□□□□ 0.34
USF3-203ENST00000491165 A0A087WW49 117 aa17.19■□□□□ 0.34
USF3-203ENST00000491165 SNAI2O43623 268 aa17.19■□□□□ 0.34
USF3-203ENST00000491165 FGF6P10767 208 aa17.19■□□□□ 0.34
USF3-203ENST00000491165 ARL3P36405 182 aa17.19■□□□□ 0.34
USF3-203ENST00000491165 PEF1Q9UBV8 284 aaKnown RBP17.19■□□□□ 0.34
USF3-203ENST00000491165 RBAKDNA6NC62 111 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 CBY3A6NI87 242 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 PPBPP02775 128 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 C4orf3Q8WVX3 66 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 PRAC2D3DTV9 90 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 LINC01559Q495D7 138 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 RNASE8Q8TDE3 154 aaKnown RBP17.18■□□□□ 0.34
USF3-203ENST00000491165 RNF185Q96GF1 192 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 SLC50A1Q9BRV3 221 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 MAP1LC3AQ9H492 121 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 MSRB1Q9NZV6 116 aa17.18■□□□□ 0.34
USF3-203ENST00000491165 TSSC4Q9Y5U2 329 aaPredicted RBP17.18■□□□□ 0.34
USF3-203ENST00000491165 TMEM97Q5BJF2 176 aa17.17■□□□□ 0.34
USF3-203ENST00000491165 RNF182Q8N6D2 247 aa17.17■□□□□ 0.34
USF3-203ENST00000491165 OR11H1Q8NG94 326 aa17.16■□□□□ 0.34
USF3-203ENST00000491165 ATP6V0BQ99437 205 aa17.16■□□□□ 0.34
USF3-203ENST00000491165 CITED1Q99966 193 aa17.16■□□□□ 0.34
USF3-203ENST00000491165 SEC11AP67812 179 aa17.15■□□□□ 0.34
USF3-203ENST00000491165 NSUN5P1Q3KNT7 163 aa17.15■□□□□ 0.34
USF3-203ENST00000491165 UNQ9165/PRO28630Q6UXU0 137 aa17.15■□□□□ 0.34
USF3-203ENST00000491165 ANK2Q01484 3957 aa17.15■□□□□ 0.34
USF3-203ENST00000491165 BOD1L2Q8IYS8 172 aa17.15■□□□□ 0.34
USF3-203ENST00000491165 LINC01546A6NGU7 62 aa17.14■□□□□ 0.33
USF3-203ENST00000491165 RAX2Q96IS3 184 aa17.14■□□□□ 0.33
USF3-203ENST00000491165 IGHV3-66A0A0C4DH42 116 aa17.14■□□□□ 0.33
USF3-203ENST00000491165 AMMECR1LQ6DCA0 310 aa17.13■□□□□ 0.33
USF3-203ENST00000491165 TMEM158Q8WZ71 300 aa17.13■□□□□ 0.33
USF3-203ENST00000491165 SLURP1P55000 103 aa17.12■□□□□ 0.33
USF3-203ENST00000491165 NXT2Q9NPJ8 142 aaKnown RBP17.12■□□□□ 0.33
USF3-203ENST00000491165 C7orf71A4D174 169 aa17.12■□□□□ 0.33
USF3-203ENST00000491165 TNFRSF6BO95407 300 aa17.12■□□□□ 0.33
USF3-203ENST00000491165 HOXD3P31249 432 aaPredicted RBP17.12■□□□□ 0.33
USF3-203ENST00000491165 OR9G4Q8NGQ1 327 aa17.12■□□□□ 0.33
USF3-203ENST00000491165 RBX1P62877 108 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 METTL26Q96S19 204 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 AGPAT4-IT1Q9H0P7 198 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 GAS8-AS1O95177 125 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 EDN2P20800 178 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 WFDC3Q8IUB2 231 aa17.11■□□□□ 0.33
USF3-203ENST00000491165 IGHV3OR16-13A0A075B7E8 117 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 IGHV3-74A0A0B4J1X5 117 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 SIVA1O15304 175 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 FCER1GP30273 86 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 LEPP41159 167 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 TMEM78Q5T7P6 136 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 NDUFA11Q86Y39 141 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 MRPL53Q96EL3 112 aaKnown RBP17.1■□□□□ 0.33
USF3-203ENST00000491165 MDFIQ99750 246 aa17.1■□□□□ 0.33
USF3-203ENST00000491165 IGKV3D-20A0A0C4DH25 116 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 TCTAP57738 103 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 FHL3Q13643 280 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 C18orf15Q96N68 181 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 TRAV8-2A0A0B4J237 113 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 LINC01619G3V211 115 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 ZNF207O43670 478 aaKnown RBP17.09■□□□□ 0.33
USF3-203ENST00000491165 EVI2AP22794 236 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 DKK2Q9UBU2 259 aa17.09■□□□□ 0.33
USF3-203ENST00000491165 TRAV8-6A0A0B4J262 113 aa17.08■□□□□ 0.33
USF3-203ENST00000491165 CCL24O00175 119 aa17.08■□□□□ 0.33
USF3-203ENST00000491165 SYNJ2BPP57105 145 aa17.08■□□□□ 0.33
USF3-203ENST00000491165 HSD52Q0P140 79 aa17.08■□□□□ 0.33
USF3-203ENST00000491165 A6NDN8 102 aa17.08■□□□□ 0.32
USF3-203ENST00000491165 NDUFA4O00483 81 aa17.08■□□□□ 0.32
USF3-203ENST00000491165 C11orf21Q9P2W6 132 aa17.08■□□□□ 0.32
USF3-203ENST00000491165 IGHV3-49A0A0A0MS15 119 aa17.07■□□□□ 0.32
USF3-203ENST00000491165 NMUP48645 174 aa17.07■□□□□ 0.32
USF3-203ENST00000491165 GPHB5Q86YW7 130 aa17.07■□□□□ 0.32
USF3-203ENST00000491165 DLX4Q92988 240 aaPredicted RBP17.07■□□□□ 0.32
USF3-203ENST00000491165 TM4SF20Q53R12 229 aa17.06■□□□□ 0.32
USF3-203ENST00000491165 CMYA5Q8N3K9 4069 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 GATA1P15976 413 aaPredicted RBP17.05■□□□□ 0.32
USF3-203ENST00000491165 PSMG4Q5JS54 123 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 ADAMTSL5Q6ZMM2 481 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 SMIM15Q7Z3B0 74 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 Q8N8P6 123 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 U3KQE9 123 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 PKD1L1Q8TDX9 2849 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 CDKN1BP46527 198 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 C9orf47Q6ZRZ4 202 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 PCP2Q8IVA1 136 aa17.05■□□□□ 0.32
USF3-203ENST00000491165 H3BRM9 83 aa17.04■□□□□ 0.32
USF3-203ENST00000491165 ODF1Q14990 250 aa17.04■□□□□ 0.32
USF3-203ENST00000491165 C3orf56Q8N813 242 aa17.04■□□□□ 0.32
USF3-203ENST00000491165 SPATA3Q8NHX4 192 aa17.04■□□□□ 0.32
USF3-203ENST00000491165 PCP4P48539 62 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 OR2K2Q8NGT1 345 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 ZMAT4Q9H898 229 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 SELENOKQ9Y6D0 94 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 IGHV7-4-1A0A0J9YVY3 117 aa17.03■□□□□ 0.32
USF3-203ENST00000491165 PRSS1P07477 247 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms