RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 SHROOM3Q8TF72 1996 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 MALRD1Q5VYJ5 2156 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 TRAV17A0A0B4J275 112 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 F8W1H4 67 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 NUPR1O60356 82 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 SFT2D2O95562 160 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 CYB5AP00167 134 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 IGKCP01834 107 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 ASIPP42127 132 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 ATP5EP56381 51 aaPredicted RBP1.98□□□□□ -2.09
FN1-222ENST00000485567 RHOHQ15669 191 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 COMMD6Q7Z4G1 85 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 TMEM254Q8TBM7 123 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 TSLPQ969D9 159 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 LHFPL6Q9Y693 200 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 ERVK-7P63135 1459 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 SCAPERQ9BY12 1400 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 SHANK1Q9Y566 2161 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 MCM3APO60318 1980 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 PTPRBP23467 1997 aa1.98□□□□□ -2.09
FN1-222ENST00000485567 PLXNA3P51805 1871 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 USP54Q70EL1 1684 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 GAPVD1Q14C86 1478 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 A0A1W2PNM2 257 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 TCRBV4S1A1TA0A5B7 111 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 IGLC7A0M8Q6 106 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 APOC3P02656 99 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 FAUP35544 74 aaKnown RBP1.97□□□□□ -2.09
FN1-222ENST00000485567 BRD3OSQ6XYD6 125 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 CLECL1Q8IZS7 167 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 SPTSSBQ8NFR3 76 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 FAM213BQ8TBF2 198 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 S100A16Q96FQ6 103 aaKnown RBP1.97□□□□□ -2.09
FN1-222ENST00000485567 S100A13Q99584 98 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 UACAQ9BZF9 1416 aa1.97□□□□□ -2.09
FN1-222ENST00000485567 DIDO1Q9BTC0 2240 aaKnown RBP1.97□□□□□ -2.09
FN1-222ENST00000485567 NOTCH2Q04721 2471 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 GOLGA3Q08378 1498 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 MAGI2Q86UL8 1455 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 TRBV7-7A0A0K0K1E9 115 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 ERC2-IT1O76042 136 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 GYPAP02724 150 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 HINT1P49773 126 aaPredicted RBP1.96□□□□□ -2.1
FN1-222ENST00000485567 Q1T7F1 81 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 C9orf116Q5BN46 136 aaPredicted RBP1.96□□□□□ -2.1
FN1-222ENST00000485567 SLC48A1Q6P1K1 146 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 C15orf53Q8NAA6 179 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 UQCR10Q9UDW1 63 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 MGAMO43451 1857 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 TRPM6Q9BX84 2022 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 ABCC3O15438 1527 aa1.96□□□□□ -2.1
FN1-222ENST00000485567 MYH1P12882 1939 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 CCDC141Q6ZP82 1450 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 TRAV12-1A0A0B4J245 112 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 MUC21A0A140T8X8 626 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 C2orf70A6NJV1 201 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 TRAPPC2P0DI81 140 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 TRAPPC2BP0DI82 140 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 CXCL8P10145 99 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 GNG11P61952 73 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 SEC11AP67812 179 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 ERHP84090 104 aaKnown RBP1.95□□□□□ -2.1
FN1-222ENST00000485567 DEFA5Q01523 94 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 KRTAP26-1Q6PEX3 210 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
FN1-222ENST00000485567 AMELYQ99218 206 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 CYSTM1Q9H1C7 97 aa1.95□□□□□ -2.1
FN1-222ENST00000485567 MRPL35Q9NZE8 188 aaKnown RBP1.95□□□□□ -2.1
FN1-222ENST00000485567 PXDNLA1KZ92 1463 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 ARAP2Q8WZ64 1704 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 TNRC6AQ8NDV7 1962 aaKnown RBP1.94□□□□□ -2.1
FN1-222ENST00000485567 HCG22E2RYF7 251 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 ATOX1O00244 68 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 PDCD5O14737 125 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 POLR2JP52435 117 aaKnown RBP1.94□□□□□ -2.1
FN1-222ENST00000485567 RPL7L1Q6DKI1 246 aaKnown RBP1.94□□□□□ -2.1
FN1-222ENST00000485567 ZNF833PQ6ZTB9 187 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 Q9BRP9 147 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 PRO2289Q9P1D8 64 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 KIDINS220Q9ULH0 1771 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 IFT140Q96RY7 1462 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 SLX4Q8IY92 1834 aa1.94□□□□□ -2.1
FN1-222ENST00000485567 CASZ1Q86V15 1759 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 KIAA1549Q9HCM3 1950 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 LRP5O75197 1615 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 TRAV2A0A0B4J234 112 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 A6NIN4 97 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 CTSGP08311 255 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 CCL8P80075 99 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.93□□□□□ -2.1
FN1-222ENST00000485567 KRTAP4-3Q9BYR4 195 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 SMCO4Q9NRQ5 59 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 NDUFB11Q9NX14 153 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 COL24A1Q17RW2 1714 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 MARF1Q9Y4F3 1742 aaKnown RBP1.93□□□□□ -2.1
FN1-222ENST00000485567 PRR14LQ5THK1 2151 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 CCDC88BA6NC98 1476 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 PTPRMP28827 1452 aa1.93□□□□□ -2.1
FN1-222ENST00000485567 CCDC88CQ9P219 2028 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms