RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 TACC2O95359 2948 aa11.85□□□□□ -0.51
SSR4-206ENST00000460616 DOPEY1Q5JWR5 2465 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 C19orf84I3L1E1 186 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 COX6B1P14854 86 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 SBSPONQ8IVN8 264 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 SPTAN1Q13813 2472 aaKnown RBP11.84□□□□□ -0.51
SSR4-206ENST00000460616 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
SSR4-206ENST00000460616 RASL10AQ92737 203 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
SSR4-206ENST00000460616 Q6ZQT7 251 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 HRNRQ86YZ3 2850 aaPredicted RBP11.83□□□□□ -0.52
SSR4-206ENST00000460616 SCGB1C2P0DMR2 95 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 C2orf66Q6UXQ4 117 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 ANKRD29Q8N6D5 301 aa11.83□□□□□ -0.52
SSR4-206ENST00000460616 LYNX1G3V0Z9 82 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 LYNX1P0DP58 116 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 TENM4Q6N022 2769 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 BUB3O43684 328 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 TGFAP01135 160 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 NDPQ00604 133 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 ABCA4P78363 2273 aa11.82□□□□□ -0.52
SSR4-206ENST00000460616 IGHV3-66A0A0C4DH42 116 aa11.81□□□□□ -0.52
SSR4-206ENST00000460616 A0A0J9YY99 117 aa11.81□□□□□ -0.52
SSR4-206ENST00000460616 B5MCH6 92 aa11.81□□□□□ -0.52
SSR4-206ENST00000460616 CFC1BP0CG36 223 aa11.81□□□□□ -0.52
SSR4-206ENST00000460616 CFC1P0CG37 223 aa11.81□□□□□ -0.52
SSR4-206ENST00000460616 RPL39LQ96EH5 51 aaKnown RBP11.8□□□□□ -0.52
SSR4-206ENST00000460616 PKDREJQ9NTG1 2253 aa11.8□□□□□ -0.52
SSR4-206ENST00000460616 LRBAP50851 2863 aa11.8□□□□□ -0.52
SSR4-206ENST00000460616 E7EQL1 145 aa11.8□□□□□ -0.52
SSR4-206ENST00000460616 C10orf126Q8N4M7 172 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 CITED1Q99966 193 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 CSMD1Q96PZ7 3565 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 DCHS2Q6V1P9 2916 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 M0R381 172 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 PLA2G2AP14555 144 aa11.79□□□□□ -0.52
SSR4-206ENST00000460616 IGHV3OR16-13A0A075B7E8 117 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 IGHV3-74A0A0B4J1X5 117 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.78□□□□□ -0.52
SSR4-206ENST00000460616 PRO1854Q9UHT4 67 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 IGHV3-30P01768 117 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 NHLRC4P0CG21 123 aaPredicted RBP11.78□□□□□ -0.52
SSR4-206ENST00000460616 IGHV3-30-5P0DP03 117 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 SRD5A1P18405 259 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 HERVK_113P61574 105 aa11.78□□□□□ -0.52
SSR4-206ENST00000460616 TRAV8-2A0A0B4J237 113 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 SPRY2O43597 315 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 CRYGDP07320 174 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 C14orf178Q8N769 122 aaPredicted RBP11.77□□□□□ -0.53
SSR4-206ENST00000460616 AJUBAQ96IF1 538 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 C11orf86A6NJI1 115 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 RHODO00212 210 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 SLC25A20O43772 301 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 CLEC3BP05452 202 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 PRTN3P24158 256 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 GAGE2EQ4V326 116 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 C9orf47Q6ZRZ4 202 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 Q6ZS46 218 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 DPH3P1Q9H4G8 78 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 HIF1ANQ9NWT6 349 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 GAGE2DQ9UEU5 116 aa11.77□□□□□ -0.53
SSR4-206ENST00000460616 HELZ2Q9BYK8 2649 aaKnown RBP11.77□□□□□ -0.53
SSR4-206ENST00000460616 CENPVL3A0A0U1RRI6 287 aa11.76□□□□□ -0.53
SSR4-206ENST00000460616 EMP1P54849 157 aa11.76□□□□□ -0.53
SSR4-206ENST00000460616 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
SSR4-206ENST00000460616 ASIPP42127 132 aa11.76□□□□□ -0.53
SSR4-206ENST00000460616 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
SSR4-206ENST00000460616 C9JAW5 83 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 SNCGO76070 127 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 DUSP14O95147 198 aaKnown RBP11.75□□□□□ -0.53
SSR4-206ENST00000460616 C15orf32Q32M92 178 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 CRYBG3Q68DQ2 2970 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 IGLV4-69A0A075B6H9 119 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 IGHV3-49A0A0A0MS15 119 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 MGPP08493 103 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 MRPL53Q96EL3 112 aaKnown RBP11.75□□□□□ -0.53
SSR4-206ENST00000460616 RAX2Q96IS3 184 aa11.75□□□□□ -0.53
SSR4-206ENST00000460616 CLPSL1A2RUU4 121 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 S100A4P26447 101 aaKnown RBP11.74□□□□□ -0.53
SSR4-206ENST00000460616 NDUFV3P56181 108 aaKnown RBP11.74□□□□□ -0.53
SSR4-206ENST00000460616 PRR9Q5T870 116 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 LY6G5BQ8NDX9 201 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 J3KRW8 73 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
SSR4-206ENST00000460616 PHLDA3Q9Y5J5 127 aa11.74□□□□□ -0.53
SSR4-206ENST00000460616 A0A1W2PPR1 153 aa11.73□□□□□ -0.53
SSR4-206ENST00000460616 B9A039 149 aa11.73□□□□□ -0.53
SSR4-206ENST00000460616 TSHBP01222 138 aa11.73□□□□□ -0.53
SSR4-206ENST00000460616 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
SSR4-206ENST00000460616 TIMD4Q96H15 378 aa11.73□□□□□ -0.53
SSR4-206ENST00000460616 TRAV4A0A0B4J268 109 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms