RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 MYMXA0A1B0GTQ4 84 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 HLA-DRB4P13762 266 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 LMO4P61968 165 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 ZFAND2AQ8N6M9 145 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 LINC00477Q96M19 166 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 DPH3P1Q9H4G8 78 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 HLA-DRB4X5D2U9 266 aa5.71□□□□□ -1.49
SMARCC1-202ENST00000425518 FLNBO75369 2602 aaKnown RBP5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 PRSS29PA6NIE9 313 aa5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 SRSF9Q13242 221 aaKnown RBP eCLIP5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 CD300EQ496F6 205 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 TMEM238LA0A1B0GVL6 79 aa5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 PF4V1P10720 104 aa5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 PRADC1Q9BSG0 188 aa5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 TSSC4Q9Y5U2 329 aaPredicted RBP5.71□□□□□ -1.5
SMARCC1-202ENST00000425518 SORL1Q92673 2214 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 ZNF815PA8K554 130 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 F5H697 171 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 SMAGPQ0VAQ4 97 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 KLHL30-AS1Q8NEE0 82 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 HOXA3O43365 443 aaPredicted RBP5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 SLC25A16P16260 332 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 TAL2Q16559 108 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 RRN3P1Q2M238 152 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 SAMD13Q5VXD3 122 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 GPHB5Q86YW7 130 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 ITLN2Q8WWU7 325 aaPredicted RBP5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 MOB4Q9Y3A3 225 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 TRAV12-1A0A0B4J245 112 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 OVOL1O14753 267 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 UCNP55089 124 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 JPT2Q9H910 190 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 ZNF462Q96JM2 2506 aa5.7□□□□□ -1.5
SMARCC1-202ENST00000425518 TRBV7-3A0A075B6L6 115 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 F8W1H4 67 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 DUSP14O95147 198 aaKnown RBP5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 LGALS1P09382 135 aaKnown RBP5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 AZU1P20160 251 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 C20orf78Q9BR46 151 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 PGPEP1Q9NXJ5 209 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 LOC107984156A0A0G2JMH3 177 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 J3QR89 54 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 ARL17AQ8IVW1 177 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 SIGMAR1Q99720 223 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 SPANXB1Q9NS25 103 aaPredicted RBP5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 MRPL16Q9NX20 251 aaKnown RBP5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 A0A087WWL8 130 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 FAM223BA6NKX1 122 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 APOMO95445 188 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 FAM223AQ8IWN6 122 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 PLEKHB2Q96CS7 222 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 RHPN1-AS1Q9BWJ2 59 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 LENEPQ9Y5L5 61 aa5.69□□□□□ -1.5
SMARCC1-202ENST00000425518 LINC01549A6NIU2 74 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 IGKV3-20P01619 116 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 SPAG8Q99932 426 aaPredicted RBP5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 PTPN13Q12923 2485 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 GAGE12HA6NDE8 117 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 INSL3P51460 131 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 BLCAPP62952 87 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 ZFHX3Q15911 3703 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 NDUFA4O00483 81 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 RNASE3P12724 160 aaKnown RBP5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 LY6DQ14210 128 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 KLK9Q2XQG4 91 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 FAM74A4Q5TZK3 123 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 KLK9Q9UKQ9 250 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 TP53TG1Q9Y2A0 90 aa5.68□□□□□ -1.5
SMARCC1-202ENST00000425518 EDN2P20800 178 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 RPL39P62891 51 aaKnown RBP5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 FAM159AQ6UWV7 190 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 Q6ZS46 218 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 TRAV12-3A0A0B4J271 114 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 CD7P09564 240 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 PSMB2P49721 201 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 TMEM170BQ5T4T1 132 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 H3BUX3 64 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 SOCS3O14543 225 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 IGHV4-38-2P0DP08 117 aa5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 MORN3Q6PF18 240 aaPredicted RBP5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 ZNF256Q9Y2P7 627 aaPredicted RBP5.67□□□□□ -1.5
SMARCC1-202ENST00000425518 RNF223E7ERA6 249 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 ZNF418Q8TF45 676 aaPredicted RBP5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 TGFAP01135 160 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 ZFP2Q6ZN57 461 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 USP9YO00507 2555 aaPredicted RBP5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 C19orf84I3L1E1 186 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 CRYGDP07320 174 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 KIR2DL4Q99706 377 aa5.66□□□□□ -1.5
SMARCC1-202ENST00000425518 IGHV4-61A0A0C4DH41 118 aa5.65□□□□□ -1.5
SMARCC1-202ENST00000425518 A6NJY4 79 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms