RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 TRBV6-8A0A0A6YYG3 113 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 CCDC179H3BU77 68 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 J3QLW9 94 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 GNG4P50150 75 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 TEX261Q6UWH6 196 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 AGPAT4-IT1Q9H0P7 198 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 CLTCQ00610 1675 aaKnown RBP2.4□□□□□ -2.03
LSM5-205ENST00000409952 MUC6Q6W4X9 2439 aa2.4□□□□□ -2.03
LSM5-205ENST00000409952 FASNP49327 2511 aaKnown RBP2.39□□□□□ -2.03
LSM5-205ENST00000409952 TMEM131LA2VDJ0 1609 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 CCNB3Q8WWL7 1395 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 ZC3H13Q5T200 1668 aaKnown RBP2.39□□□□□ -2.03
LSM5-205ENST00000409952 TNRC6CQ9HCJ0 1690 aaKnown RBP2.39□□□□□ -2.03
LSM5-205ENST00000409952 SNAPC5O75971 98 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 HIST1H1DP16402 221 aaKnown RBP2.39□□□□□ -2.03
LSM5-205ENST00000409952 C10orf55Q5SWW7 151 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 COA5Q86WW8 74 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 C5orf17Q8NAS9 161 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 TAS2R8Q9NYW2 309 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 ORMDL1Q9P0S3 153 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 USP32Q8NFA0 1604 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 CEP290O15078 2479 aa2.39□□□□□ -2.03
LSM5-205ENST00000409952 MAP3K1Q13233 1512 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 SPEF2Q9C093 1822 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 F8W1H4 67 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 CCL16O15467 120 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 COX7CP15954 63 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 SLC25A26Q70HW3 274 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 FANCMQ8IYD8 2048 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 VSTM2AQ8TAG5 236 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 LINC00052Q96N35 136 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 SEC11CQ9BY50 192 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 ZFP30Q9Y2G7 519 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 GCN1Q92616 2671 aaKnown RBP2.38□□□□□ -2.03
LSM5-205ENST00000409952 ZFHX2Q9C0A1 2572 aaPredicted RBP2.38□□□□□ -2.03
LSM5-205ENST00000409952 LTBP2Q14767 1821 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 SZT2Q5T011 3432 aa2.38□□□□□ -2.03
LSM5-205ENST00000409952 COL4A4P53420 1690 aaPredicted RBP2.37□□□□□ -2.03
LSM5-205ENST00000409952 NEXMIFQ5QGS0 1516 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 ERICH3Q5RHP9 1530 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 ABCA10Q8WWZ4 1543 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 ADGRB1O14514 1584 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 SAMD9LQ8IVG5 1584 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 IGHV3-33P01772 117 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 IGKV4-1P06312 121 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 RNASE3P12724 160 aaKnown RBP2.37□□□□□ -2.03
LSM5-205ENST00000409952 ADCYAP1P18509 176 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.37□□□□□ -2.03
LSM5-205ENST00000409952 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 ZNF292O60281 2723 aa2.37□□□□□ -2.03
LSM5-205ENST00000409952 RGPD3A6NKT7 1758 aaPredicted RBP2.36□□□□□ -2.03
LSM5-205ENST00000409952 RGPD4Q7Z3J3 1758 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 ABCA6Q8N139 1617 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 TPPP2P59282 170 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 PPP3R1P63098 170 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 FAM74A1Q5RGS3 127 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 OR2T2Q6IF00 324 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 BRD3OSQ6XYD6 125 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 DYNLRB2Q8TF09 96 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 IER3IP1Q9Y5U9 82 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 NKTRP30414 1462 aaKnown RBP2.36□□□□□ -2.03
LSM5-205ENST00000409952 TOPAZ1Q8N9V7 1692 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 MGAMO43451 1857 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 NCKAP5O14513 1909 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 PRDM15P57071 1507 aaPredicted RBP2.36□□□□□ -2.03
LSM5-205ENST00000409952 CASP8AP2Q9UKL3 1982 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 UGGT1Q9NYU2 1555 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 FAM208BQ5VWN6 2430 aa2.36□□□□□ -2.03
LSM5-205ENST00000409952 PREX2Q70Z35 1606 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 MROH1Q8NDA8 1641 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 ASH1LQ9NR48 2969 aaKnown RBP2.35□□□□□ -2.03
LSM5-205ENST00000409952 COL24A1Q17RW2 1714 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 TRAV2A0A0B4J234 112 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 TNFP01375 233 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 Q56UQ5 140 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 Q6ZRN7 208 aaPredicted RBP2.35□□□□□ -2.03
LSM5-205ENST00000409952 SPANXDQ9BXN6 97 aa2.35□□□□□ -2.03
LSM5-205ENST00000409952 TOP2AP11388 1531 aaKnown RBP2.35□□□□□ -2.03
LSM5-205ENST00000409952 TEP1Q99973 2627 aaKnown RBP2.35□□□□□ -2.03
LSM5-205ENST00000409952 MYO9BQ13459 2157 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 COL4A5P29400 1685 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 C10orf71Q711Q0 1435 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 ZFC3H1O60293 1989 aaKnown RBP2.34□□□□□ -2.03
LSM5-205ENST00000409952 ANKRD17O75179 2603 aaKnown RBP2.34□□□□□ -2.03
LSM5-205ENST00000409952 MPDZO75970 2070 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 A0A1W2PRS3 328 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 H3BRM9 83 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 J3QRE1 110 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 S100A8P05109 93 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 NUMA1Q14980 2115 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 C3orf62Q6ZUJ4 267 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 KLK9Q9UKQ9 250 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 PLXNA3P51805 1871 aa2.34□□□□□ -2.03
LSM5-205ENST00000409952 SPTBN4Q9H254 2564 aa2.34□□□□□ -2.04
LSM5-205ENST00000409952 TANC2Q9HCD6 1990 aa2.34□□□□□ -2.04
LSM5-205ENST00000409952 USP54Q70EL1 1684 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms