RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 CD7P09564 240 aa18.85■□□□□ 0.61
CPNE1-205ENST00000401607 PHLDA3Q9Y5J5 127 aa18.84■□□□□ 0.61
CPNE1-205ENST00000401607 D6R8Y8 96 aa18.83■□□□□ 0.61
CPNE1-205ENST00000401607 RAB4AP20338 218 aa18.83■□□□□ 0.61
CPNE1-205ENST00000401607 EVI2AP22794 236 aa18.83■□□□□ 0.61
CPNE1-205ENST00000401607 URB1-AS1Q96HZ7 61 aa18.83■□□□□ 0.61
CPNE1-205ENST00000401607 CMC4P56277 68 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-205ENST00000401607 TRPT1Q86TN4 253 aaKnown RBP18.83■□□□□ 0.6
CPNE1-205ENST00000401607 C19orf73Q9NVV2 129 aa18.83■□□□□ 0.6
CPNE1-205ENST00000401607 IGHV3-16A0A0C4DH30 117 aa18.82■□□□□ 0.6
CPNE1-205ENST00000401607 M0R381 172 aa18.82■□□□□ 0.6
CPNE1-205ENST00000401607 STHQ8IWL8 128 aa18.82■□□□□ 0.6
CPNE1-205ENST00000401607 Q8N1Y9 231 aa18.82■□□□□ 0.6
CPNE1-205ENST00000401607 FAM110AQ9BQ89 295 aa18.82■□□□□ 0.6
CPNE1-205ENST00000401607 KRTAP24-1Q3LI83 254 aa18.81■□□□□ 0.6
CPNE1-205ENST00000401607 NXPH4O95158 308 aa18.81■□□□□ 0.6
CPNE1-205ENST00000401607 ORMDL3Q8N138 153 aa18.81■□□□□ 0.6
CPNE1-205ENST00000401607 SMIM6P0DI80 62 aa18.8■□□□□ 0.6
CPNE1-205ENST00000401607 NIT1Q86X76 327 aa18.8■□□□□ 0.6
CPNE1-205ENST00000401607 C9orf85Q96MD7 179 aa18.8■□□□□ 0.6
CPNE1-205ENST00000401607 MDFICQ9P1T7 246 aa18.8■□□□□ 0.6
CPNE1-205ENST00000401607 SMKR1H3BMG3 65 aa18.79■□□□□ 0.6
CPNE1-205ENST00000401607 PRELID3AQ96N28 172 aa18.79■□□□□ 0.6
CPNE1-205ENST00000401607 WFDC10AQ9H1F0 79 aa18.79■□□□□ 0.6
CPNE1-205ENST00000401607 PYY3Q5JQD4 70 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 SMIM15Q7Z3B0 74 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 C12orf57Q99622 126 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 NCR2O95944 276 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 CKS2P33552 79 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 RNASEKQ6P5S7 137 aaKnown RBP18.78■□□□□ 0.6
CPNE1-205ENST00000401607 SAMD10Q9BYL1 202 aa18.78■□□□□ 0.6
CPNE1-205ENST00000401607 GAS8-AS1O95177 125 aa18.76■□□□□ 0.59
CPNE1-205ENST00000401607 PMCHP20382 165 aa18.76■□□□□ 0.59
CPNE1-205ENST00000401607 MUC4Q99102 2169 aa18.76■□□□□ 0.59
CPNE1-205ENST00000401607 TRGV11A0A075B6L2 103 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 NPYP01303 97 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 INSP01308 110 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 AMTP48728 403 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 INSL3P51460 131 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 C9orf66Q5T8R8 295 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 FAM19A2Q8N3H0 131 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 C20orf144Q9BQM9 153 aa18.75■□□□□ 0.59
CPNE1-205ENST00000401607 CBY3A6NI87 242 aa18.74■□□□□ 0.59
CPNE1-205ENST00000401607 HSBP1O75506 76 aa18.74■□□□□ 0.59
CPNE1-205ENST00000401607 PPBPP02775 128 aa18.74■□□□□ 0.59
CPNE1-205ENST00000401607 LINC00614P0C842 121 aa18.73■□□□□ 0.59
CPNE1-205ENST00000401607 CHCHD1Q96BP2 118 aaKnown RBP18.73■□□□□ 0.59
CPNE1-205ENST00000401607 XCL2Q9UBD3 114 aa18.73■□□□□ 0.59
CPNE1-205ENST00000401607 NIPBLQ6KC79 2804 aaeCLIP18.73■□□□□ 0.591e-8■□□□□ 10.5
CPNE1-205ENST00000401607 C14orf178Q8N769 122 aaPredicted RBP18.73■□□□□ 0.59
CPNE1-205ENST00000401607 JMJD1CQ15652 2540 aa18.72■□□□□ 0.59
CPNE1-205ENST00000401607 GATA1P15976 413 aaPredicted RBP18.72■□□□□ 0.59
CPNE1-205ENST00000401607 Q6ZWC4 215 aa18.72■□□□□ 0.59
CPNE1-205ENST00000401607 AP1S3Q96PC3 154 aa18.72■□□□□ 0.59
CPNE1-205ENST00000401607 LINC00467Q9BRT7 94 aa18.72■□□□□ 0.59
CPNE1-205ENST00000401607 DPH3P1Q9H4G8 78 aa18.72■□□□□ 0.59
CPNE1-205ENST00000401607 TENM1Q9UKZ4 2725 aa18.71■□□□□ 0.59
CPNE1-205ENST00000401607 PRM2P04554 102 aa18.71■□□□□ 0.59
CPNE1-205ENST00000401607 HTN1P15515 57 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 PRIMA1Q86XR5 153 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 KIF25-AS1Q9Y6Z4 181 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 TRAV26-2A0A0B4J265 109 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 LINC01587Q99440 93 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 LAMTOR2Q9Y2Q5 125 aa18.7■□□□□ 0.58
CPNE1-205ENST00000401607 LOC389332A0A1B0GUA5 103 aa18.69■□□□□ 0.58
CPNE1-205ENST00000401607 IFI27P40305 119 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-205ENST00000401607 NUTF2P61970 127 aaKnown RBP18.69■□□□□ 0.58
CPNE1-205ENST00000401607 JOSD1Q15040 202 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-205ENST00000401607 C1orf158Q8N1D5 194 aa18.69■□□□□ 0.58
CPNE1-205ENST00000401607 JPT2Q9H910 190 aa18.69■□□□□ 0.58
CPNE1-205ENST00000401607 TNFRSF6BO95407 300 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 GIG44P09565 113 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-205ENST00000401607 CDPF1Q6NVV7 123 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 PRSS3P2Q8NHM4 247 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 NRACQ8N912 160 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 WFDC9Q8NEX5 89 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 MRAP2Q96G30 205 aa18.68■□□□□ 0.58
CPNE1-205ENST00000401607 LINC00315P59091 139 aa18.67■□□□□ 0.58
CPNE1-205ENST00000401607 PMCHL1Q16048 86 aa18.67■□□□□ 0.58
CPNE1-205ENST00000401607 SYT8Q8NBV8 401 aa18.67■□□□□ 0.58
CPNE1-205ENST00000401607 ZNF747Q9BV97 191 aa18.67■□□□□ 0.58
CPNE1-205ENST00000401607 TEP1Q99973 2627 aaKnown RBP18.66■□□□□ 0.58
CPNE1-205ENST00000401607 IGHV1-24A0A0C4DH33 117 aa18.66■□□□□ 0.58
CPNE1-205ENST00000401607 RPL35AP18077 110 aaKnown RBP18.66■□□□□ 0.58
CPNE1-205ENST00000401607 DEFB125Q8N687 156 aa18.66■□□□□ 0.58
CPNE1-205ENST00000401607 POM121L12Q8N7R1 296 aa18.66■□□□□ 0.58
CPNE1-205ENST00000401607 FA2HQ7L5A8 372 aa18.65■□□□□ 0.58
CPNE1-205ENST00000401607 MGPP08493 103 aa18.65■□□□□ 0.58
CPNE1-205ENST00000401607 C11orf72Q8NBR9 251 aa18.65■□□□□ 0.58
CPNE1-205ENST00000401607 MCRIP2Q9BUT9 160 aaKnown RBP18.65■□□□□ 0.58
CPNE1-205ENST00000401607 MAP1LC3AQ9H492 121 aa18.65■□□□□ 0.58
CPNE1-205ENST00000401607 AP5S1Q9NUS5 200 aa18.65■□□□□ 0.58
CPNE1-205ENST00000401607 ZNF415Q09FC8 603 aa18.64■□□□□ 0.57
CPNE1-205ENST00000401607 NIT2Q9NQR4 276 aa18.64■□□□□ 0.57
CPNE1-205ENST00000401607 GSN-AS1Q9NRJ2 163 aa18.64■□□□□ 0.57
CPNE1-205ENST00000401607 ATRQ13535 2644 aa18.64■□□□□ 0.57
CPNE1-205ENST00000401607 ZNF876PQ49A33 203 aa18.63■□□□□ 0.57
CPNE1-205ENST00000401607 GTSCR1Q86UQ5 136 aa18.63■□□□□ 0.57
CPNE1-205ENST00000401607 TMEM208Q9BTX3 173 aa18.63■□□□□ 0.57
CPNE1-205ENST00000401607 A0A087WWL8 130 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms