RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ANAPC13Q9BS18 74 aa11.07□□□□□ -0.64
SREBF1-205ENST00000395757 C11orf21Q9P2W6 132 aa11.07□□□□□ -0.64
SREBF1-205ENST00000395757 PEF1Q9UBV8 284 aaKnown RBP11.07□□□□□ -0.64
SREBF1-205ENST00000395757 H3BUT2 72 aa11.07□□□□□ -0.64
SREBF1-205ENST00000395757 CTRLP40313 264 aa11.07□□□□□ -0.64
SREBF1-205ENST00000395757 TRBV7-1A0A0A6YYK4 115 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 J3QR89 54 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 AVPP01185 164 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 ST20Q9HBF5 79 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 KLK9Q9UKQ9 250 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 IGKV3D-20A0A0C4DH25 116 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 TAX1BP3O14907 124 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
SREBF1-205ENST00000395757 COX6B1P14854 86 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 C12orf54Q6X4T0 127 aa11.06□□□□□ -0.64
SREBF1-205ENST00000395757 DEFB112Q30KQ8 113 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 JMJD8Q96S16 334 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 ASIPP42127 132 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 HIST2H2BCQ6DN03 193 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
SREBF1-205ENST00000395757 C20orf173Q96LM9 149 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 JPT2Q9H910 190 aa11.05□□□□□ -0.64
SREBF1-205ENST00000395757 NPIPB6E9PJ23 425 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 ZNF56Q15929 161 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 AJUBAQ96IF1 538 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 Q8N6K4 173 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 OR2K2Q8NGT1 345 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 FLNAP21333 2647 aaKnown RBP11.04□□□□□ -0.64
SREBF1-205ENST00000395757 SPINK13Q1W4C9 94 aa11.04□□□□□ -0.64
SREBF1-205ENST00000395757 SCGB1A1P11684 91 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 SCGB1D4Q6XE38 83 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 USP24Q9UPU5 2620 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 IGHV3-64A0A075B6Q5 118 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 PRR9Q5T870 116 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 MTURNQ8N3F0 131 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
SREBF1-205ENST00000395757 TMEM97Q5BJF2 176 aa11.02□□□□□ -0.64
SREBF1-205ENST00000395757 FAM110AQ9BQ89 295 aa11.02□□□□□ -0.64
SREBF1-205ENST00000395757 TNFRSF18Q9Y5U5 241 aa11.02□□□□□ -0.64
SREBF1-205ENST00000395757 NF1P21359 2839 aa11.02□□□□□ -0.65
SREBF1-205ENST00000395757 B4DSR2 109 aa11.02□□□□□ -0.65
SREBF1-205ENST00000395757 CSMD2Q7Z408 3487 aa11.02□□□□□ -0.65
SREBF1-205ENST00000395757 CLPSL1A2RUU4 121 aa11.02□□□□□ -0.65
SREBF1-205ENST00000395757 IGHG4P01861 327 aa11.02□□□□□ -0.65
SREBF1-205ENST00000395757 C10orf105Q8TEF2 133 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 NHP2Q9NX24 153 aaKnown RBP11.01□□□□□ -0.65
SREBF1-205ENST00000395757 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 TMEM8BA6NDV4 472 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 GAGE5Q13069 117 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 GAGE6Q13070 117 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
SREBF1-205ENST00000395757 FBN2P35556 2912 aa11.01□□□□□ -0.65
SREBF1-205ENST00000395757 PRM2P04554 102 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 CD300EQ496F6 205 aaPredicted RBP11□□□□□ -0.65
SREBF1-205ENST00000395757 C3orf56Q8N813 242 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 TRAV8-2A0A0B4J237 113 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 A0A0G2JLM5 398 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 K7ERJ3 54 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 BVES-AS1Q5T3Y7 98 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 MRPS16Q9Y3D3 137 aaKnown RBP11□□□□□ -0.65
SREBF1-205ENST00000395757 C9orf139Q6ZV77 190 aa11□□□□□ -0.65
SREBF1-205ENST00000395757 CITED2Q99967 270 aaPredicted RBP10.99□□□□□ -0.65
SREBF1-205ENST00000395757 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
SREBF1-205ENST00000395757 ITPR3Q14573 2671 aa10.99□□□□□ -0.65
SREBF1-205ENST00000395757 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
SREBF1-205ENST00000395757 DAZ1Q9NQZ3 744 aaKnown RBP10.99□□□□□ -0.65
SREBF1-205ENST00000395757 CHD6Q8TD26 2715 aa10.99□□□□□ -0.65
SREBF1-205ENST00000395757 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
SREBF1-205ENST00000395757 NXT2Q9NPJ8 142 aaKnown RBP10.99□□□□□ -0.65
SREBF1-205ENST00000395757 EBI3Q14213 229 aa10.98□□□□□ -0.65
SREBF1-205ENST00000395757 H7C2G1 150 aa10.98□□□□□ -0.65
SREBF1-205ENST00000395757 IGKCP01834 107 aa10.98□□□□□ -0.65
SREBF1-205ENST00000395757 SRSF9Q13242 221 aaKnown RBP eCLIP10.98□□□□□ -0.65
SREBF1-205ENST00000395757 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
SREBF1-205ENST00000395757 LAGE3Q14657 143 aa10.98□□□□□ -0.65
SREBF1-205ENST00000395757 PRORYQ9H606 182 aa10.98□□□□□ -0.65
SREBF1-205ENST00000395757 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
SREBF1-205ENST00000395757 LINC01545Q5VT33 79 aa10.97□□□□□ -0.65
SREBF1-205ENST00000395757 FLNBO75369 2602 aaKnown RBP10.97□□□□□ -0.65
SREBF1-205ENST00000395757 MRPL16Q9NX20 251 aaKnown RBP10.97□□□□□ -0.65
SREBF1-205ENST00000395757 A6NDN8 102 aa10.97□□□□□ -0.65
SREBF1-205ENST00000395757 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
SREBF1-205ENST00000395757 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
SREBF1-205ENST00000395757 DYNLRB2Q8TF09 96 aa10.96□□□□□ -0.65
SREBF1-205ENST00000395757 DPM2O94777 84 aa10.96□□□□□ -0.65
SREBF1-205ENST00000395757 COX8AP10176 69 aa10.96□□□□□ -0.65
SREBF1-205ENST00000395757 SCRT2Q9NQ03 307 aa10.96□□□□□ -0.65
SREBF1-205ENST00000395757 SNRPD3P62318 126 aaKnown RBP10.96□□□□□ -0.66
SREBF1-205ENST00000395757 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.66
SREBF1-205ENST00000395757 HOXA3O43365 443 aaPredicted RBP10.95□□□□□ -0.66
SREBF1-205ENST00000395757 IGLC6P0CF74 106 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 PIFOQ8TCI5 191 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 CYSLTR1Q9Y271 337 aa10.95□□□□□ -0.66
SREBF1-205ENST00000395757 A0A096LNJ9 63 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms