RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 F8P00451 2351 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 TRAV26-2A0A0B4J265 109 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 H3BMM0 161 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 DUSP14O95147 198 aaKnown RBP13.25□□□□□ -0.29
CLDND1-204ENST00000394185 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
CLDND1-204ENST00000394185 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
CLDND1-204ENST00000394185 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 TRRAPQ9Y4A5 3859 aa13.25□□□□□ -0.29
CLDND1-204ENST00000394185 TRAV2A0A0B4J234 112 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 HLA-DRB4P13762 266 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 SIGLEC8Q9NYZ4 499 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 PHLDA3Q9Y5J5 127 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 HLA-DRB4X5D2U9 266 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 MUC4Q99102 2169 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 CD7P09564 240 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 LINC00173Q6ZV60 143 aa13.24□□□□□ -0.29
CLDND1-204ENST00000394185 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
CLDND1-204ENST00000394185 C3orf79P0CE67 100 aa13.23□□□□□ -0.29
CLDND1-204ENST00000394185 ODF3L2Q3SX64 289 aa13.23□□□□□ -0.29
CLDND1-204ENST00000394185 Q8N976 141 aa13.23□□□□□ -0.29
CLDND1-204ENST00000394185 SPAG8Q99932 426 aaPredicted RBP13.23□□□□□ -0.29
CLDND1-204ENST00000394185 CRXO43186 299 aaPredicted RBP13.22□□□□□ -0.29
CLDND1-204ENST00000394185 CACNG7P62955 275 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 MDFICQ9P1T7 246 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 SAP30O75446 220 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 TDRG1Q3Y452 100 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 DNLZQ5SXM8 178 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 PRO1933Q9H354 126 aa13.22□□□□□ -0.29
CLDND1-204ENST00000394185 FOSL1P15407 271 aa13.21□□□□□ -0.29
CLDND1-204ENST00000394185 Q8N1Y9 231 aa13.21□□□□□ -0.29
CLDND1-204ENST00000394185 C14orf178Q8N769 122 aaPredicted RBP13.21□□□□□ -0.29
CLDND1-204ENST00000394185 ATRQ13535 2644 aa13.21□□□□□ -0.29
CLDND1-204ENST00000394185 CRLF1O75462 422 aa13.21□□□□□ -0.3
CLDND1-204ENST00000394185 PRM2P04554 102 aa13.21□□□□□ -0.3
CLDND1-204ENST00000394185 TSPOP30536 169 aa13.21□□□□□ -0.3
CLDND1-204ENST00000394185 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.3
CLDND1-204ENST00000394185 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
CLDND1-204ENST00000394185 A8MTW9 85 aa13.2□□□□□ -0.3
CLDND1-204ENST00000394185 TNFRSF6BO95407 300 aa13.2□□□□□ -0.3
CLDND1-204ENST00000394185 JPT2Q9H910 190 aa13.2□□□□□ -0.3
CLDND1-204ENST00000394185 IGHV3-16A0A0C4DH30 117 aa13.19□□□□□ -0.3
CLDND1-204ENST00000394185 MED14OSP0DP75 135 aa13.19□□□□□ -0.3
CLDND1-204ENST00000394185 FA2HQ7L5A8 372 aa13.19□□□□□ -0.3
CLDND1-204ENST00000394185 SMIM15Q7Z3B0 74 aa13.19□□□□□ -0.3
CLDND1-204ENST00000394185 SPATA12Q7Z6I5 190 aa13.19□□□□□ -0.3
CLDND1-204ENST00000394185 IGHV1OR15-1A0A075B7D0 117 aa13.18□□□□□ -0.3
CLDND1-204ENST00000394185 A0A096LNJ9 63 aa13.18□□□□□ -0.3
CLDND1-204ENST00000394185 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
CLDND1-204ENST00000394185 HTN1P15515 57 aa13.18□□□□□ -0.3
CLDND1-204ENST00000394185 TRAV25A0A0B4J276 109 aa13.18□□□□□ -0.3
CLDND1-204ENST00000394185 PPBPP02775 128 aa13.17□□□□□ -0.3
CLDND1-204ENST00000394185 S100A12P80511 92 aa13.17□□□□□ -0.3
CLDND1-204ENST00000394185 NRACQ8N912 160 aa13.17□□□□□ -0.3
CLDND1-204ENST00000394185 TEP1Q99973 2627 aaKnown RBP13.17□□□□□ -0.3
CLDND1-204ENST00000394185 NXPH4O95158 308 aa13.17□□□□□ -0.3
CLDND1-204ENST00000394185 LEPROTL1O95214 131 aa13.17□□□□□ -0.3
CLDND1-204ENST00000394185 NDUFA11Q86Y39 141 aa13.16□□□□□ -0.3
CLDND1-204ENST00000394185 OR2K2Q8NGT1 345 aa13.16□□□□□ -0.3
CLDND1-204ENST00000394185 SPATA3Q8NHX4 192 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 WFDC10AQ9H1F0 79 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 BAHCC1Q9P281 2608 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 TEX43Q6ZNM6 134 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 MAP1LC3AQ9H492 121 aa13.15□□□□□ -0.3
CLDND1-204ENST00000394185 MGPP08493 103 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 ATOH7Q8N100 152 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
CLDND1-204ENST00000394185 DPH3P1Q9H4G8 78 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 A0A087WWL8 130 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 CBY3A6NI87 242 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 BTF3P20290 206 aaKnown RBP13.14□□□□□ -0.31
CLDND1-204ENST00000394185 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-204ENST00000394185 AP1S3Q96PC3 154 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 KIF25-AS1Q9Y6Z4 181 aa13.14□□□□□ -0.31
CLDND1-204ENST00000394185 LINC00315P59091 139 aa13.13□□□□□ -0.31
CLDND1-204ENST00000394185 RPL39LQ96EH5 51 aaKnown RBP13.13□□□□□ -0.31
CLDND1-204ENST00000394185 PKIAP61925 76 aa13.13□□□□□ -0.31
CLDND1-204ENST00000394185 LAMTOR2Q9Y2Q5 125 aa13.13□□□□□ -0.31
CLDND1-204ENST00000394185 H0Y8G0 127 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 PF4P02776 101 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 RASL10AQ92737 203 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 TMEM70Q9BUB7 260 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 PAM16Q9Y3D7 125 aa13.12□□□□□ -0.31
CLDND1-204ENST00000394185 IGLV2-18A0A075B6J9 118 aa13.11□□□□□ -0.31
CLDND1-204ENST00000394185 STHQ8IWL8 128 aa13.11□□□□□ -0.31
CLDND1-204ENST00000394185 LINC00482Q8N8I6 264 aa13.11□□□□□ -0.31
CLDND1-204ENST00000394185 MAJINQ3KP22 176 aa13.11□□□□□ -0.31
CLDND1-204ENST00000394185 MRAP2Q96G30 205 aa13.11□□□□□ -0.31
CLDND1-204ENST00000394185 SYS1-DBNDD2H3BUS1 97 aa13.1□□□□□ -0.31
CLDND1-204ENST00000394185 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
CLDND1-204ENST00000394185 TSTD3H0UI37 97 aa13.1□□□□□ -0.31
CLDND1-204ENST00000394185 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
CLDND1-204ENST00000394185 TRPT1Q86TN4 253 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms