RNA–Protein interactions for RNA: ENST00000393238.7

TMCC1-201, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCC1, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-201ENST00000393238 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
TMCC1-201ENST00000393238 PLXNB3Q9ULL4 1909 aa7.2□□□□□ -1.26
TMCC1-201ENST00000393238 HEATR5AQ86XA9 2040 aa7.2□□□□□ -1.26
TMCC1-201ENST00000393238 DEFB104AQ8WTQ1 72 aa7.2□□□□□ -1.26
TMCC1-201ENST00000393238 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 PFN2P35080 140 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 DEFB114Q30KQ6 69 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 MRPL51Q4U2R6 128 aaKnown RBP7.19□□□□□ -1.26
TMCC1-201ENST00000393238 COL5A1P20908 1838 aaPredicted RBP7.19□□□□□ -1.26
TMCC1-201ENST00000393238 TP53BP1Q12888 1972 aaPredicted RBP7.19□□□□□ -1.26
TMCC1-201ENST00000393238 DOCK9Q9BZ29 2069 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 XCL1P47992 114 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 SRSF3P84103 164 aaKnown RBP7.19□□□□□ -1.26
TMCC1-201ENST00000393238 A0A0J9YX75 114 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 A8MWP6 167 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 COX7A2LO14548 114 aa7.19□□□□□ -1.26
TMCC1-201ENST00000393238 RPL32P62910 135 aaKnown RBP7.19□□□□□ -1.26
TMCC1-201ENST00000393238 TRAV4A0A0B4J268 109 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 NFE4Q86UQ8 179 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 A0A1B0GWB2 263 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 RPL18AQ02543 176 aaKnown RBP7.18□□□□□ -1.26
TMCC1-201ENST00000393238 ORAOV1Q8WV07 137 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 KIAA2026Q5HYC2 2103 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 LINC01548A6NM66 108 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 ESDP10768 282 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 HLA-DMBP28068 263 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 TAL2Q16559 108 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 AMTNQ6UX39 209 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 NPC2P61916 151 aa7.18□□□□□ -1.26
TMCC1-201ENST00000393238 POLR3KQ9Y2Y1 108 aaPredicted RBP7.18□□□□□ -1.26
TMCC1-201ENST00000393238 DOPEY2Q9Y3R5 2298 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 HERV-K104P63124 156 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 CLPSL2Q6UWE3 100 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 NOTCH2Q04721 2471 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 DEFB131BA0A096LNP1 70 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 C17orf77Q96MU5 243 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 ZNF702PQ9H963 129 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 TRBV10-1A0A0K0K1A3 114 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 SMIM27A0A1W2PRY6 76 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 ZC2HC1BQ5TFG8 222 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 KIR2DL5BA0A0G2JN68 375 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 KIR2DL5BA0A0G2JPC4 375 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 C4orf48Q5BLP8 95 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 KIR2DL5AQ8N109 375 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 SLC25A29Q8N8R3 303 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 KIR2DL5BQ8NHK3 375 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 SPCS1Q9Y6A9 102 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 NDUFA1O15239 70 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 CXCL5P42830 114 aa7.17□□□□□ -1.26
TMCC1-201ENST00000393238 FANCD2OSQ96PS1 177 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 CTAG1AP78358 180 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 ATRAIDQ6UW56 229 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 C22orf34Q6ZV56 151 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 NCKAP5O14513 1909 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 SYS1-DBNDD2H3BUS1 97 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 NXPH4O95158 308 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 LYPD6Q86Y78 171 aa7.16□□□□□ -1.26
TMCC1-201ENST00000393238 CXCL1P09341 107 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 NDUFA12Q9UI09 145 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 DENND4AQ7Z401 1863 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 TRAV26-2A0A0B4J265 109 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 EGR2P11161 476 aaPredicted RBP7.15□□□□□ -1.26
TMCC1-201ENST00000393238 Q8N1Y9 231 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 TRAV8-3A0A0A6YYJ7 113 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 LY6LH3BQJ8 138 aa7.15□□□□□ -1.26
TMCC1-201ENST00000393238 ETDCA0A1B0GVM5 59 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BKO60814 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BJP06899 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BOP23527 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BBP33778 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BDP58876 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BCP62807 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST2H2BEQ16778 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.15□□□□□ -1.27
TMCC1-201ENST00000393238 STPG4Q8N801 248 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BHQ93079 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BNQ99877 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 HIST1H2BMQ99879 126 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 CADP27708 2225 aa7.15□□□□□ -1.27
TMCC1-201ENST00000393238 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.27
TMCC1-201ENST00000393238 DEFB4AO15263 64 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 UNQ9165/PRO28630Q6UXU0 137 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 WIPF3A6NGB9 483 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 ZNF479Q96JC4 524 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 TRBV12-3P01733 135 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 ZNF726P1Q15940 193 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 ZNF625Q96I27 306 aaPredicted RBP7.14□□□□□ -1.27
TMCC1-201ENST00000393238 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 V9GYV3 84 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 SUMO4Q6EEV6 95 aa7.14□□□□□ -1.27
TMCC1-201ENST00000393238 ANKHD1Q8IWZ3 2542 aaKnown RBP7.13□□□□□ -1.27
TMCC1-201ENST00000393238 K7EQG2 157 aa7.13□□□□□ -1.27
TMCC1-201ENST00000393238 LGALS9BQ3B8N2 356 aa7.13□□□□□ -1.27
TMCC1-201ENST00000393238 CYYR1Q96J86 154 aa7.13□□□□□ -1.27
TMCC1-201ENST00000393238 ESM1Q9NQ30 184 aa7.13□□□□□ -1.27
TMCC1-201ENST00000393238 TRBV6-1A0A0K0K1D8 114 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms