RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 MUC4Q99102 2169 aa12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
THUMPD2-201ENST00000378727 PF4P02776 101 aa12.78□□□□□ -0.36
THUMPD2-201ENST00000378727 CD7P09564 240 aa12.78□□□□□ -0.36
THUMPD2-201ENST00000378727 CDPF1Q6NVV7 123 aa12.78□□□□□ -0.36
THUMPD2-201ENST00000378727 RNASEKQ6P5S7 137 aaKnown RBP12.78□□□□□ -0.36
THUMPD2-201ENST00000378727 FAM19A2Q8N3H0 131 aa12.78□□□□□ -0.36
THUMPD2-201ENST00000378727 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 M0R381 172 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 PMCHP20382 165 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 ORMDL3Q8N138 153 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 JMJD1CQ15652 2540 aa12.77□□□□□ -0.36
THUMPD2-201ENST00000378727 TENM1Q9UKZ4 2725 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 IGHV1OR15-1A0A075B7D0 117 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 GAS8-AS1O95177 125 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 AMTP48728 403 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 Q6ZWC4 215 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 PRELID3AQ96N28 172 aa12.77□□□□□ -0.37
THUMPD2-201ENST00000378727 IGHV3-16A0A0C4DH30 117 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 NCR2O95944 276 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 Q8N1Y9 231 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 OR11H12B2RN74 326 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 CKS2P33552 79 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 JOSD1Q15040 202 aaPredicted RBP12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 CLUHP3Q96NS8 147 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 CITED1Q99966 193 aa12.76□□□□□ -0.37
THUMPD2-201ENST00000378727 HSBP1O75506 76 aa12.75□□□□□ -0.37
THUMPD2-201ENST00000378727 NXPH4O95158 308 aa12.75□□□□□ -0.37
THUMPD2-201ENST00000378727 OR2K2Q8NGT1 345 aa12.75□□□□□ -0.37
THUMPD2-201ENST00000378727 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
THUMPD2-201ENST00000378727 NPYP01303 97 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 LINC00614P0C842 121 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 BEAN1Q3B7T3 259 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 SPATA3Q8NHX4 192 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 CHCHD1Q96BP2 118 aaKnown RBP12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 SMIM15Q7Z3B0 74 aa12.74□□□□□ -0.37
THUMPD2-201ENST00000378727 C19orf73Q9NVV2 129 aa12.73□□□□□ -0.37
THUMPD2-201ENST00000378727 PPBPP02775 128 aa12.73□□□□□ -0.37
THUMPD2-201ENST00000378727 GATA1P15976 413 aaPredicted RBP12.73□□□□□ -0.37
THUMPD2-201ENST00000378727 PMCHL1Q16048 86 aa12.73□□□□□ -0.37
THUMPD2-201ENST00000378727 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
THUMPD2-201ENST00000378727 ATRQ13535 2644 aa12.72□□□□□ -0.37
THUMPD2-201ENST00000378727 STHQ8IWL8 128 aa12.72□□□□□ -0.37
THUMPD2-201ENST00000378727 TEP1Q99973 2627 aaKnown RBP12.72□□□□□ -0.37
THUMPD2-201ENST00000378727 LOC389332A0A1B0GUA5 103 aa12.71□□□□□ -0.37
THUMPD2-201ENST00000378727 IFI27P40305 119 aaPredicted RBP12.71□□□□□ -0.37
THUMPD2-201ENST00000378727 C14orf178Q8N769 122 aaPredicted RBP12.71□□□□□ -0.37
THUMPD2-201ENST00000378727 WFDC10AQ9H1F0 79 aa12.71□□□□□ -0.37
THUMPD2-201ENST00000378727 VWFP04275 2813 aa12.71□□□□□ -0.37
THUMPD2-201ENST00000378727 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.38
THUMPD2-201ENST00000378727 IGHV1-24A0A0C4DH33 117 aa12.71□□□□□ -0.38
THUMPD2-201ENST00000378727 CMC4P56277 68 aaPredicted RBP12.71□□□□□ -0.38
THUMPD2-201ENST00000378727 PRSS3P2Q8NHM4 247 aa12.71□□□□□ -0.38
THUMPD2-201ENST00000378727 FAM110AQ9BQ89 295 aa12.71□□□□□ -0.38
THUMPD2-201ENST00000378727 DPH3P1Q9H4G8 78 aa12.7□□□□□ -0.38
THUMPD2-201ENST00000378727 CBY3A6NI87 242 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 TNFRSF6BO95407 300 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 PRM2P04554 102 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 LAMTOR2Q9Y2Q5 125 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 TRGV11A0A075B6L2 103 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 NRACQ8N912 160 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 JPT2Q9H910 190 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
THUMPD2-201ENST00000378727 INSP01308 110 aa12.68□□□□□ -0.38
THUMPD2-201ENST00000378727 HTN1P15515 57 aa12.68□□□□□ -0.38
THUMPD2-201ENST00000378727 FA2HQ7L5A8 372 aa12.68□□□□□ -0.38
THUMPD2-201ENST00000378727 XCL2Q9UBD3 114 aa12.68□□□□□ -0.38
THUMPD2-201ENST00000378727 LINC00315P59091 139 aa12.68□□□□□ -0.38
THUMPD2-201ENST00000378727 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
THUMPD2-201ENST00000378727 C20orf144Q9BQM9 153 aa12.67□□□□□ -0.38
THUMPD2-201ENST00000378727 SCGB1D1O95968 90 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 KRTDAPP60985 99 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 MAP1LC3AQ9H492 121 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 C3orf79P0CE67 100 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 KRTAP24-1Q3LI83 254 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 POM121L12Q8N7R1 296 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 LINC01587Q99440 93 aa12.66□□□□□ -0.38
THUMPD2-201ENST00000378727 PCP4L1A6NKN8 68 aa12.65□□□□□ -0.38
THUMPD2-201ENST00000378727 MGPP08493 103 aa12.65□□□□□ -0.38
THUMPD2-201ENST00000378727 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.38
THUMPD2-201ENST00000378727 Q8N976 141 aa12.65□□□□□ -0.38
THUMPD2-201ENST00000378727 A0A096LNJ9 63 aa12.65□□□□□ -0.39
THUMPD2-201ENST00000378727 GIG44P09565 113 aaPredicted RBP12.65□□□□□ -0.39
THUMPD2-201ENST00000378727 INSL3P51460 131 aa12.65□□□□□ -0.39
THUMPD2-201ENST00000378727 LINC00173Q6ZV60 143 aa12.65□□□□□ -0.39
THUMPD2-201ENST00000378727 A0A087WWL8 130 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 NUTF2P61970 127 aaKnown RBP12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 SYT8Q8NBV8 401 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 RASL10AQ92737 203 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 NOTCH3Q9UM47 2321 aa12.64□□□□□ -0.39
THUMPD2-201ENST00000378727 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms