RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 U3KQE9 123 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 IGHV3-49A0A0A0MS15 119 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 TRBV7-1A0A0A6YYK4 115 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 LINC01619G3V211 115 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 G3V318 75 aa11.23□□□□□ -0.61
PRKN-204ENST00000366896 LAGE3Q14657 143 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 EEF1AKMT3Q96AZ1 226 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 Q96MF0 132 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 PRRC2AP48634 2157 aaKnown RBP11.22□□□□□ -0.61
PRKN-204ENST00000366896 ZFHX3Q15911 3703 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 PLNP26678 52 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 INSL3P51460 131 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 CLEC19AQ6UXS0 136 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 CLUHP3Q96NS8 147 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 AGPAT4-IT1Q9H0P7 198 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 C11orf21Q9P2W6 132 aa11.22□□□□□ -0.61
PRKN-204ENST00000366896 RNF223E7ERA6 249 aa11.21□□□□□ -0.61
PRKN-204ENST00000366896 NRACQ8N912 160 aa11.21□□□□□ -0.61
PRKN-204ENST00000366896 SVIPQ8NHG7 77 aa11.21□□□□□ -0.61
PRKN-204ENST00000366896 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.61
PRKN-204ENST00000366896 SAA4P35542 130 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 CKS1BP61024 79 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 MTURNQ8N3F0 131 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 METTL26Q96S19 204 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 TRAV8-2A0A0B4J237 113 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 Q6ZQT7 251 aa11.2□□□□□ -0.62
PRKN-204ENST00000366896 CENPVL3A0A0U1RRI6 287 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 TRGV3P03979 118 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 TMEM78Q5T7P6 136 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 CR1P17927 2039 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
PRKN-204ENST00000366896 ATP5G2Q06055 141 aa11.19□□□□□ -0.62
PRKN-204ENST00000366896 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
PRKN-204ENST00000366896 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
PRKN-204ENST00000366896 MAPK1IP1LQ8NDC0 245 aa11.18□□□□□ -0.62
PRKN-204ENST00000366896 TRAV12-1A0A0B4J245 112 aa11.18□□□□□ -0.62
PRKN-204ENST00000366896 MYMXA0A1B0GTQ4 84 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 F8VRH5 84 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 MSMBP08118 114 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 C8orf86Q6ZUL3 223 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 MRAP2Q96G30 205 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 CCDC168Q8NDH2 2452 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 B4DSR2 109 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 H7C1H1 209 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 APOMO95445 188 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 FOXI1Q12951 378 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 ATP6V0E2Q8NHE4 81 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 C20orf78Q9BR46 151 aa11.17□□□□□ -0.62
PRKN-204ENST00000366896 MAP1AP78559 2803 aaPredicted RBP11.16□□□□□ -0.62
PRKN-204ENST00000366896 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 OR11H12B2RN74 326 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 OR11H1Q8NG94 326 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 OR11H2Q8NH07 326 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 FAM223BA6NKX1 122 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 HOXA3O43365 443 aaPredicted RBP11.16□□□□□ -0.62
PRKN-204ENST00000366896 C9orf139Q6ZV77 190 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 FAM223AQ8IWN6 122 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 LINC01356Q8N9X3 169 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 C1QTNF4Q9BXJ3 329 aa11.16□□□□□ -0.62
PRKN-204ENST00000366896 CFAP126Q5VTH2 177 aa11.15□□□□□ -0.62
PRKN-204ENST00000366896 TMEM219Q86XT9 240 aa11.15□□□□□ -0.62
PRKN-204ENST00000366896 NPFFO15130 113 aa11.15□□□□□ -0.62
PRKN-204ENST00000366896 CYSLTR1Q9Y271 337 aa11.15□□□□□ -0.62
PRKN-204ENST00000366896 AKAP9Q99996 3911 aa11.15□□□□□ -0.63
PRKN-204ENST00000366896 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.15□□□□□ -0.63
PRKN-204ENST00000366896 BRI3O95415 125 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
PRKN-204ENST00000366896 SCGB2A2Q13296 93 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 MRPL16Q9NX20 251 aaKnown RBP11.14□□□□□ -0.63
PRKN-204ENST00000366896 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 LINC00527Q9UJ94 153 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
PRKN-204ENST00000366896 UFC1Q9Y3C8 167 aa11.14□□□□□ -0.63
PRKN-204ENST00000366896 IGHV3OR16-10A0A075B7F0 116 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 PRR9Q5T870 116 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 DLX4Q92988 240 aaPredicted RBP11.13□□□□□ -0.63
PRKN-204ENST00000366896 CELSR1Q9NYQ6 3014 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 LCNL1Q6ZST4 164 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 LINC00477Q96M19 166 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 MOB4Q9Y3A3 225 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 BAHCC1Q9P281 2608 aa11.13□□□□□ -0.63
PRKN-204ENST00000366896 IGF1P05019 195 aa11.12□□□□□ -0.63
PRKN-204ENST00000366896 NEXN-AS1Q8NBZ9 246 aa11.12□□□□□ -0.63
PRKN-204ENST00000366896 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
PRKN-204ENST00000366896 NFE4Q86UQ8 179 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms