RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 MYO18AQ92614 2054 aaKnown RBP1.61□□□□□ -2.15
RNU6-1249P-201ENST00000363237 COL4A1P02462 1669 aa1.61□□□□□ -2.15
RNU6-1249P-201ENST00000363237 DAPK1P53355 1430 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 CASP8AP2Q9UKL3 1982 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 SPAARA0A1B0GVQ0 90 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 C20orf202A1L168 122 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 SNAPC5O75971 98 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 NDUFB6O95139 128 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 IGHV3-30P01768 117 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 GYPBP06028 91 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 PIRTP0C851 137 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 IGHV3-30-5P0DP03 117 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 IL7P13232 177 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 PDE6GP18545 87 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 KRTAP6-3Q3LI67 103 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 Q56UQ5 140 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 SPRNQ5BIV9 151 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 Q6AWC8 147 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 LYPD5Q6UWN5 251 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 DMAC1Q96GE9 116 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 CACNA1GO43497 2377 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 ZNF142P52746 1687 aaPredicted RBP1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 BAHCC1Q9P281 2608 aa1.6□□□□□ -2.15
RNU6-1249P-201ENST00000363237 CTTNBP2Q8WZ74 1663 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 TRBV6-7A0A0A0MS04 114 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 TRBV10-1A0A0K0K1A3 114 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 NUPR2A6NF83 97 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 MCRIP1C9JLW8 97 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 TNFP01375 233 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 SMIM6P0DI80 62 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 IL9P15248 144 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 TPPP2P59282 170 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 PPP3R1P63098 170 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 C12orf73Q69YU5 71 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 CSAG1Q6PB30 78 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 PP632Q6XCG6 107 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 NDUFA11Q86Y39 141 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 LINC00526Q96FQ7 95 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 C14orf144Q96I85 54 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 LIMD2Q9BT23 127 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 WFDC10AQ9H1F0 79 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 C22orf24Q9Y442 160 aa1.59□□□□□ -2.15
RNU6-1249P-201ENST00000363237 SMARCA2P51531 1590 aa1.59□□□□□ -2.16
RNU6-1249P-201ENST00000363237 NRKQ7Z2Y5 1582 aa1.59□□□□□ -2.16
RNU6-1249P-201ENST00000363237 KTN1Q86UP2 1357 aaKnown RBP1.59□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PHRF1Q9P1Y6 1649 aaKnown RBP1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 ARFGEF3Q5TH69 2177 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PTPRMP28827 1452 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MAPKBP1O60336 1514 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CXorf51AA0A1B0GTR3 108 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 SNCGO76070 127 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IGKCP01834 107 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 KRTAP12-1P59990 96 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 TMEM141Q96I45 108 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PPP3R2Q96LZ3 170 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 ATG5Q9H1Y0 275 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MRPL36Q9P0J6 103 aaKnown RBP1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 NDUFA12Q9UI09 145 aa1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 INTS1Q8N201 2190 aaKnown RBP1.58□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MUC22E2RYF6 1773 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IGKV3-7A0A075B6H7 116 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 APOC4-APOC2K7ER74 178 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 KLF7O75840 302 aaPredicted RBP1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 APOC2P02655 101 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 SLC25A6P12236 298 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RBP2P50120 134 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 SPATA45Q537H7 98 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 SLC48A1Q6P1K1 146 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MRPL57Q9BQC6 102 aaKnown RBP1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IER3IP1Q9Y5U9 82 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PCNX2A6NKB5 2137 aa1.57□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PZPP20742 1482 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CDK12Q9NYV4 1490 aaPredicted RBP1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 UNC13CQ8NB66 2214 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 TRAV23DV6A0A075B6W5 121 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PIGBOS1A0A0B4J2F0 54 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MRPL54Q6P161 138 aaKnown RBP1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 Q6ZS92 163 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 LSM10Q969L4 123 aaKnown RBP1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 ODF3Q96PU9 254 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RPRMQ9NS64 109 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 MRPL35Q9NZE8 188 aaKnown RBP1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PEAK1Q9H792 1746 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 DLEC1Q9Y238 1755 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CCNB3Q8WWL7 1395 aa1.56□□□□□ -2.16
RNU6-1249P-201ENST00000363237 KDM6BO15054 1643 aa1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 HIGD1CA8MV81 97 aa1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 PRB4P10163 310 aaPredicted RBP1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 IQCJQ1A5X6 159 aa1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RPL7L1Q6DKI1 246 aaKnown RBP1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 GTF2H5Q6ZYL4 71 aa1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 VPS8Q8N3P4 1428 aa1.55□□□□□ -2.16
RNU6-1249P-201ENST00000363237 NWD2Q9ULI1 1742 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 A6NIN4 97 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 CBLN1P23435 193 aa1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 RPL37AP61513 92 aaKnown RBP1.54□□□□□ -2.16
RNU6-1249P-201ENST00000363237 C9orf116Q5BN46 136 aaPredicted RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms