RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 SCRT2Q9NQ03 307 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 MUC21A0A0G2JKD1 596 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 MUC21A0A140T8X8 626 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 H3BVH4 76 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 S100A4P26447 101 aaKnown RBP13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 NDUFA6P56556 154 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 CACNG7P62955 275 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 COA6Q5JTJ3 125 aaKnown RBP13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 SAMD5Q5TGI4 173 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
SMARCD3-202ENST00000356800 RNASE3P12724 160 aaKnown RBP13.22□□□□□ -0.29
SMARCD3-202ENST00000356800 MORN3Q6PF18 240 aaPredicted RBP13.22□□□□□ -0.29
SMARCD3-202ENST00000356800 C1orf158Q8N1D5 194 aa13.22□□□□□ -0.29
SMARCD3-202ENST00000356800 OR10AG1Q8NH19 301 aa13.22□□□□□ -0.29
SMARCD3-202ENST00000356800 PRM2P04554 102 aa13.21□□□□□ -0.29
SMARCD3-202ENST00000356800 KIAA1644Q3SXP7 199 aa13.21□□□□□ -0.29
SMARCD3-202ENST00000356800 MUC4Q99102 2169 aa13.21□□□□□ -0.29
SMARCD3-202ENST00000356800 SSTP61278 116 aa13.21□□□□□ -0.3
SMARCD3-202ENST00000356800 TMEM191AQ9H0A3 160 aa13.21□□□□□ -0.3
SMARCD3-202ENST00000356800 MSRB1Q9NZV6 116 aa13.21□□□□□ -0.3
SMARCD3-202ENST00000356800 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 IGHV3-16A0A0C4DH30 117 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 UBE2CO00762 179 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 SPRY2O43597 315 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 HOXA5P20719 270 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 SPANXN1Q5VSR9 72 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 DMRTA1Q5VZB9 504 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 CSNK1G2-AS1Q8NCQ2 148 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 LINC00467Q9BRT7 94 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 MDFICQ9P1T7 246 aa13.2□□□□□ -0.3
SMARCD3-202ENST00000356800 SRIP30626 198 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 Q0VG73 95 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 FAM104BQ5XKR9 115 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 LINC01587Q99440 93 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 PHLDA3Q9Y5J5 127 aa13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 TIMM8BQ9Y5J9 83 aaPredicted RBP13.19□□□□□ -0.3
SMARCD3-202ENST00000356800 ALKBH7Q9BT30 221 aaPredicted RBP13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 TRGV11A0A075B6L2 103 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 CBY3A6NI87 242 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 NXPH4O95158 308 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 IGHV4-30-4P0DP06 118 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 HTN1P15515 57 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 OR10J3Q5JRS4 329 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 C9orf85Q96MD7 179 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 C1QTNF4Q9BXJ3 329 aa13.18□□□□□ -0.3
SMARCD3-202ENST00000356800 TMEM256Q8N2U0 113 aa13.17□□□□□ -0.3
SMARCD3-202ENST00000356800 ZMAT5Q9UDW3 170 aaKnown RBP13.17□□□□□ -0.3
SMARCD3-202ENST00000356800 IGHV3OR16-12A0A075B7B8 117 aa13.16□□□□□ -0.3
SMARCD3-202ENST00000356800 AMN1Q8IY45 258 aa13.16□□□□□ -0.3
SMARCD3-202ENST00000356800 TMEM208Q9BTX3 173 aa13.16□□□□□ -0.3
SMARCD3-202ENST00000356800 NOTCH1P46531 2555 aa13.15□□□□□ -0.3
SMARCD3-202ENST00000356800 SMIM15Q7Z3B0 74 aa13.15□□□□□ -0.3
SMARCD3-202ENST00000356800 M0R381 172 aa13.15□□□□□ -0.31
SMARCD3-202ENST00000356800 AZU1P20160 251 aa13.15□□□□□ -0.31
SMARCD3-202ENST00000356800 ZNF705AQ6ZN79 300 aaPredicted RBP13.15□□□□□ -0.31
SMARCD3-202ENST00000356800 GOLT1BQ9Y3E0 138 aa13.15□□□□□ -0.31
SMARCD3-202ENST00000356800 U3KQK5 164 aa13.15□□□□□ -0.31
SMARCD3-202ENST00000356800 NBEAL1Q6ZS30 2694 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 KIR2DL5BA0A0G2JN68 375 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 KIR2DL5BA0A0G2JPC4 375 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 EVI2AP22794 236 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 KIR2DL5AQ8N109 375 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 HIST3H2BBQ8N257 126 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 C11orf72Q8NBR9 251 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 KIR2DL5BQ8NHK3 375 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 C18orf32Q8TCD1 76 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 RNF185Q96GF1 192 aa13.14□□□□□ -0.31
SMARCD3-202ENST00000356800 RAB4AP20338 218 aa13.13□□□□□ -0.31
SMARCD3-202ENST00000356800 MRPL51Q4U2R6 128 aaKnown RBP13.13□□□□□ -0.31
SMARCD3-202ENST00000356800 MGAM2Q2M2H8 2515 aa13.13□□□□□ -0.31
SMARCD3-202ENST00000356800 BAGE3Q86Y29 109 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 PPBPP02775 128 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 ESDP10768 282 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 APOC4P55056 127 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 ORMDL3Q8N138 153 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 GSN-AS1Q9NRJ2 163 aa13.12□□□□□ -0.31
SMARCD3-202ENST00000356800 IFITM10A6NMD0 228 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 A8MZ25 164 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 D6R8Y8 96 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 LINC00310P59036 64 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 KRTAP21-3Q3LHN1 58 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 KPRPQ5T749 579 aaPredicted RBP13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 RNASE8Q8TDE3 154 aaKnown RBP13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 AP1S3Q96PC3 154 aa13.11□□□□□ -0.31
SMARCD3-202ENST00000356800 ZNF415Q09FC8 603 aa13.1□□□□□ -0.31
SMARCD3-202ENST00000356800 SYT8Q8NBV8 401 aa13.1□□□□□ -0.31
SMARCD3-202ENST00000356800 NBEAL2Q6ZNJ1 2754 aa13.1□□□□□ -0.31
SMARCD3-202ENST00000356800 SERF1AO75920 110 aa13.09□□□□□ -0.31
SMARCD3-202ENST00000356800 CKS2P33552 79 aa13.09□□□□□ -0.31
SMARCD3-202ENST00000356800 PTH2Q96A98 100 aa13.09□□□□□ -0.31
SMARCD3-202ENST00000356800 DPH3P1Q9H4G8 78 aa13.09□□□□□ -0.31
SMARCD3-202ENST00000356800 NUPR1O60356 82 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 PRB2P02812 416 aaPredicted RBP13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 S100A2P29034 98 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 IQCJQ1A5X6 159 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 PDZD11Q5EBL8 140 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 PIK3CD-AS1Q5SR53 167 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 IL17DQ8TAD2 202 aa13.08□□□□□ -0.31
SMARCD3-202ENST00000356800 PRELID3AQ96N28 172 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms