RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 IGHV4-61A0A0C4DH41 118 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 SH2D1AO60880 128 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 TEX29Q8N6K0 151 aa10.66□□□□□ -0.7
SF1-202ENST00000334944 DPM2O94777 84 aa10.65□□□□□ -0.7
SF1-202ENST00000334944 IGHG4P01861 327 aa10.65□□□□□ -0.7
SF1-202ENST00000334944 CCDC140Q96MF4 163 aa10.65□□□□□ -0.7
SF1-202ENST00000334944 RPL7P18124 248 aaKnown RBP10.65□□□□□ -0.7
SF1-202ENST00000334944 HLA-DRB4P13762 266 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 HLA-DRB4X5D2U9 266 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 CREBBPQ92793 2442 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 TLN2Q9Y4G6 2542 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 OOSP1A8MZH6 123 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 KLK15Q9H2R5 256 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 CUBNO60494 3623 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 HOXA3O43365 443 aaPredicted RBP10.64□□□□□ -0.71
SF1-202ENST00000334944 LYPD1Q8N2G4 141 aa10.64□□□□□ -0.71
SF1-202ENST00000334944 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
SF1-202ENST00000334944 Q6ZQT7 251 aa10.63□□□□□ -0.71
SF1-202ENST00000334944 FAM110DQ8TAY7 271 aaPredicted RBP10.63□□□□□ -0.71
SF1-202ENST00000334944 PRR25Q96S07 402 aa10.63□□□□□ -0.71
SF1-202ENST00000334944 U3KQK5 164 aa10.63□□□□□ -0.71
SF1-202ENST00000334944 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
SF1-202ENST00000334944 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 ANKRD17O75179 2603 aaKnown RBP10.62□□□□□ -0.71
SF1-202ENST00000334944 J3KRW8 73 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 CRLF1O75462 422 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 ORM1P02763 201 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 ZNF493Q6ZR52 646 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
SF1-202ENST00000334944 TRBV12-3P01733 135 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 PDE6HQ13956 83 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 C5orf56Q8N8D9 126 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 MAP1LC3AQ9H492 121 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 ZFAND3Q9H8U3 227 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 EPG5Q9HCE0 2579 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 IGKV3-7A0A075B6H7 116 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 IGHV3-11P01762 117 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 DEFB1P60022 68 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 TRAV4A0A0B4J268 109 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 BUB3O43684 328 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 CCL19Q99731 98 aa10.61□□□□□ -0.71
SF1-202ENST00000334944 FBN2P35556 2912 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 Q6ZS46 218 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 IL17RELQ6ZVW7 336 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 USP24Q9UPU5 2620 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 IGHV4-30-2A0A087WSY4 118 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 ID1P41134 155 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 PPDPFLQ8WWR9 84 aa10.6□□□□□ -0.71
SF1-202ENST00000334944 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 ATP5J2P56134 94 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 ANKRD29Q8N6D5 301 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 SORL1Q92673 2214 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 FAM110AQ9BQ89 295 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 GATD1Q8NB37 220 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 MAPK1IP1LQ8NDC0 245 aa10.59□□□□□ -0.71
SF1-202ENST00000334944 TRBV6-1A0A0K0K1D8 114 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 SPRY2O43597 315 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 TCL1BO95988 128 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 TRGV3P03979 118 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 BLCAPP62952 87 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE12JA6NER3 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE7O76087 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 PRB1P04280 392 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE12FP0CL80 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE12GP0CL81 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE12IP0CL82 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 GAGE4Q13068 117 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 SRSF9Q13242 221 aaKnown RBP eCLIP10.58□□□□□ -0.72
SF1-202ENST00000334944 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 TEN1Q86WV5 123 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
SF1-202ENST00000334944 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 IGHV1-69DA0A0B4J2H0 117 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 H3BUX3 64 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 IGHV1-69P01742 117 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 SRSF1Q07955 248 aaKnown RBP eCLIP10.57□□□□□ -0.724e-12■□□□□ 10.5
SF1-202ENST00000334944 UNQ9165/PRO28630Q6UXU0 137 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 PLEKHB2Q96CS7 222 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 TRAV8-2A0A0B4J237 113 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 NDUFV3P56181 108 aaKnown RBP10.57□□□□□ -0.72
SF1-202ENST00000334944 GAGE2BQ13066 116 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 ZNF575Q86XF7 245 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 EEF1AKMT3Q96AZ1 226 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
SF1-202ENST00000334944 SCGB1D4Q6XE38 83 aa10.56□□□□□ -0.72
SF1-202ENST00000334944 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
SF1-202ENST00000334944 MXRA5Q9NR99 2828 aa10.56□□□□□ -0.72
SF1-202ENST00000334944 NAV2Q8IVL1 2488 aa10.56□□□□□ -0.72
SF1-202ENST00000334944 IGF1P05019 195 aa10.56□□□□□ -0.72
SF1-202ENST00000334944 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms