RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
LRCH3-201ENST00000334859 DCANP1Q8TF63 244 aa13.32□□□□□ -0.28
LRCH3-201ENST00000334859 FBN2P35556 2912 aa13.31□□□□□ -0.28
LRCH3-201ENST00000334859 TGFAP01135 160 aa13.31□□□□□ -0.28
LRCH3-201ENST00000334859 PSMG4Q5JS54 123 aa13.31□□□□□ -0.28
LRCH3-201ENST00000334859 USP24Q9UPU5 2620 aa13.31□□□□□ -0.28
LRCH3-201ENST00000334859 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
LRCH3-201ENST00000334859 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
LRCH3-201ENST00000334859 DOPEY2Q9Y3R5 2298 aa13.3□□□□□ -0.28
LRCH3-201ENST00000334859 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
LRCH3-201ENST00000334859 ORMDL2Q53FV1 153 aa13.3□□□□□ -0.28
LRCH3-201ENST00000334859 FAM159AQ6UWV7 190 aa13.3□□□□□ -0.28
LRCH3-201ENST00000334859 KLLNB2CW77 178 aa13.29□□□□□ -0.28
LRCH3-201ENST00000334859 ZNF688P0C7X2 276 aa13.29□□□□□ -0.28
LRCH3-201ENST00000334859 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
LRCH3-201ENST00000334859 C20orf78Q9BR46 151 aa13.29□□□□□ -0.28
LRCH3-201ENST00000334859 PRB1P04280 392 aa13.29□□□□□ -0.28
LRCH3-201ENST00000334859 A0A087WX48 190 aa13.28□□□□□ -0.28
LRCH3-201ENST00000334859 TRAV12-3A0A0B4J271 114 aa13.28□□□□□ -0.28
LRCH3-201ENST00000334859 SCGB3A1Q96QR1 104 aa13.28□□□□□ -0.28
LRCH3-201ENST00000334859 IGKV3-20P01619 116 aa13.27□□□□□ -0.28
LRCH3-201ENST00000334859 MUC4Q99102 2169 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 MXRA5Q9NR99 2828 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 PTPN13Q12923 2485 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 A0A096LNT2 108 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 J3QLI3 93 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 COX6B1P14854 86 aa13.27□□□□□ -0.29
LRCH3-201ENST00000334859 CD7P09564 240 aa13.26□□□□□ -0.29
LRCH3-201ENST00000334859 PLNP26678 52 aa13.26□□□□□ -0.29
LRCH3-201ENST00000334859 CHAC1Q9BUX1 264 aa13.26□□□□□ -0.29
LRCH3-201ENST00000334859 ABCA12Q86UK0 2595 aa13.26□□□□□ -0.29
LRCH3-201ENST00000334859 H3BRM9 83 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 NXPH4O95158 308 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 SYNJ2BPP57105 145 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 SNRPD3P62318 126 aaKnown RBP13.25□□□□□ -0.29
LRCH3-201ENST00000334859 RNASE8Q8TDE3 154 aaKnown RBP13.25□□□□□ -0.29
LRCH3-201ENST00000334859 TOMM6Q96B49 74 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 RNF223E7ERA6 249 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 GCSHP23434 173 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 RAB37Q96AX2 223 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 NAA38Q9BRA0 125 aaKnown RBP13.25□□□□□ -0.29
LRCH3-201ENST00000334859 CSTL1Q9H114 145 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 VPREB3Q9UKI3 123 aa13.25□□□□□ -0.29
LRCH3-201ENST00000334859 TMEM89A2RUT3 159 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 PPP1R17O96001 155 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 NEGR1Q7Z3B1 354 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 CREBBPQ92793 2442 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 TRBV25-1A0A075B6N4 114 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 H3BUT2 72 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 K7EMI3 77 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 K7EP13 123 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 C2orf66Q6UXQ4 117 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 JPT2Q9H910 190 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 HIGD1BQ9P298 99 aa13.24□□□□□ -0.29
LRCH3-201ENST00000334859 NAV2Q8IVL1 2488 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 TRAV12-2A0A075B6T6 113 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 A0A087WWL8 130 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 C9orf118A6NHY6 69 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 F8VRH5 84 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 H7C1H1 209 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 TRAV12-1A0A0B4J245 112 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 DUX5Q96PT3 197 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 JMJD8Q96S16 334 aa13.23□□□□□ -0.29
LRCH3-201ENST00000334859 CHTOPQ9Y3Y2 248 aaKnown RBP13.23□□□□□ -0.29
LRCH3-201ENST00000334859 UBR5O95071 2799 aaPredicted RBP13.23□□□□□ -0.29
LRCH3-201ENST00000334859 LGALS1P09382 135 aaKnown RBP13.22□□□□□ -0.29
LRCH3-201ENST00000334859 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 IGHV4OR15-8A0A075B7B6 117 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 A0A087WW49 117 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 A0A0J9YX75 114 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 GAGE10A6NGK3 116 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 F5H697 171 aa13.22□□□□□ -0.29
LRCH3-201ENST00000334859 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
LRCH3-201ENST00000334859 FXYD2P54710 66 aa13.21□□□□□ -0.29
LRCH3-201ENST00000334859 LINC00315P59091 139 aa13.21□□□□□ -0.29
LRCH3-201ENST00000334859 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
LRCH3-201ENST00000334859 K7EQG2 157 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 HOXD3P31249 432 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-201ENST00000334859 FAM74A4Q5TZK3 123 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 SUMO4Q6EEV6 95 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 NEXN-AS1Q8NBZ9 246 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 DEFB104AQ8WTQ1 72 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 SPINK13Q1W4C9 94 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 POM121L12Q8N7R1 296 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 BAALCQ8WXS3 180 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 ODF3Q96PU9 254 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 ZNF702PQ9H963 129 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 BEX4Q9NWD9 120 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-201ENST00000334859 AGRNO00468 2067 aa13.2□□□□□ -0.3
LRCH3-201ENST00000334859 MYO9AB2RTY4 2548 aa13.19□□□□□ -0.3
LRCH3-201ENST00000334859 MAPKAPK5-AS1Q8N8E1 139 aa13.19□□□□□ -0.3
LRCH3-201ENST00000334859 CBY1Q9Y3M2 126 aa13.19□□□□□ -0.3
LRCH3-201ENST00000334859 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
LRCH3-201ENST00000334859 ELANEP08246 267 aa13.19□□□□□ -0.3
LRCH3-201ENST00000334859 GTF2H5Q6ZYL4 71 aa13.19□□□□□ -0.3
LRCH3-201ENST00000334859 SORL1Q92673 2214 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 IGHV4-31P0DP07 118 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 Q6YL49 198 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 MDFICQ9P1T7 246 aa13.18□□□□□ -0.3
LRCH3-201ENST00000334859 IGHV3-16A0A0C4DH30 117 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms