RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 PTH2Q96A98 100 aa12.36□□□□□ -0.43
SLIT3-201ENST00000332966 CHCHD5Q9BSY4 110 aa12.36□□□□□ -0.43
SLIT3-201ENST00000332966 CACNA1BQ00975 2339 aa12.35□□□□□ -0.43
SLIT3-201ENST00000332966 BUB3O43684 328 aa12.35□□□□□ -0.43
SLIT3-201ENST00000332966 ZFP2Q6ZN57 461 aa12.35□□□□□ -0.43
SLIT3-201ENST00000332966 BRD3OSQ6XYD6 125 aa12.35□□□□□ -0.43
SLIT3-201ENST00000332966 MUSTN1Q8IVN3 82 aa12.35□□□□□ -0.43
SLIT3-201ENST00000332966 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 PCNX2A6NKB5 2137 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 PRSS47A8MTI9 375 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 TRACP01848 142 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 DKK4Q9UBT3 224 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 RNF183Q96D59 192 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 MSMPQ1L6U9 139 aa12.34□□□□□ -0.43
SLIT3-201ENST00000332966 C11orf68Q9H3H3 251 aaKnown RBP12.34□□□□□ -0.43
SLIT3-201ENST00000332966 PRAC2D3DTV9 90 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 IGLV1-47P01700 117 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 IGLC6P0CF74 106 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 KLK9Q9UKQ9 250 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 U3KQK5 164 aa12.33□□□□□ -0.43
SLIT3-201ENST00000332966 ATG2AQ2TAZ0 1938 aa12.33□□□□□ -0.44
SLIT3-201ENST00000332966 TRGV1A0A0A0MS02 117 aa12.33□□□□□ -0.44
SLIT3-201ENST00000332966 TMEM126AQ9H061 195 aa12.33□□□□□ -0.44
SLIT3-201ENST00000332966 DOPEY2Q9Y3R5 2298 aa12.33□□□□□ -0.44
SLIT3-201ENST00000332966 IGKV2D-26A0A0A0MRZ7 120 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 MT-ATP8P03928 68 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 KNCNA6PVL3 124 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 TIMM17AQ99595 171 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 SPRY2O43597 315 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 C9orf47Q6ZRZ4 202 aa12.32□□□□□ -0.44
SLIT3-201ENST00000332966 TRBV10-2A0A0K0K1G8 114 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 MALP21145 153 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 INSP01308 110 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 ZGRF1Q86YA3 2104 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 UFSP1Q6NVU6 142 aa12.31□□□□□ -0.44
SLIT3-201ENST00000332966 WT1P19544 449 aaPredicted RBP12.3□□□□□ -0.44
SLIT3-201ENST00000332966 SUMO4Q6EEV6 95 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 IGHV7-4-1A0A0J9YVY3 117 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 TCL1BO95988 128 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 ZNF80P51504 273 aaPredicted RBP12.3□□□□□ -0.44
SLIT3-201ENST00000332966 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 IGFL2Q6UWQ7 119 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 H3BT86 120 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 SPATA25Q9BR10 227 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 MSRB2Q9Y3D2 182 aa12.3□□□□□ -0.44
SLIT3-201ENST00000332966 TRAV13-2A0A0B4J235 113 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 IGHV7-81A0A0B4J1V7 117 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 TRAV12-2A0A075B6T6 113 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 F6UB75 175 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 MED14OSP0DP75 135 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 URB1-AS1Q96HZ7 61 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 A0A0J9YXV3 536 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 HERVK_113P63121 156 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 BPESC1Q9GZL8 116 aa12.29□□□□□ -0.44
SLIT3-201ENST00000332966 SPRY4Q9C004 299 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 LAMTOR3Q9UHA4 124 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 EML5Q05BV3 1969 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 BAALC-AS2P0C853 105 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 HCFC1P51610 2035 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 VWC2LB2RUY7 222 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 CRIP1P50238 77 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 JPT2Q9H910 190 aa12.28□□□□□ -0.44
SLIT3-201ENST00000332966 SYNJ2BPP57105 145 aa12.27□□□□□ -0.44
SLIT3-201ENST00000332966 DEFB131AP59861 70 aa12.27□□□□□ -0.44
SLIT3-201ENST00000332966 IGLV2-11P01706 119 aa12.27□□□□□ -0.45
SLIT3-201ENST00000332966 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.45
SLIT3-201ENST00000332966 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
SLIT3-201ENST00000332966 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.45
SLIT3-201ENST00000332966 IGHV3-53P01767 116 aa12.26□□□□□ -0.45
SLIT3-201ENST00000332966 NDUFV3P56181 108 aaKnown RBP12.26□□□□□ -0.45
SLIT3-201ENST00000332966 FAM236AA0A1B0GUQ0 79 aa12.26□□□□□ -0.45
SLIT3-201ENST00000332966 FAM236BA0A1B0GV22 79 aa12.26□□□□□ -0.45
SLIT3-201ENST00000332966 FANCD2OSQ96PS1 177 aa12.26□□□□□ -0.45
SLIT3-201ENST00000332966 RUSC1-AS1Q66K80 236 aa12.25□□□□□ -0.45
SLIT3-201ENST00000332966 C16orf54Q6UWD8 224 aa12.25□□□□□ -0.45
SLIT3-201ENST00000332966 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
SLIT3-201ENST00000332966 COX6B1P14854 86 aa12.25□□□□□ -0.45
SLIT3-201ENST00000332966 RNASE13Q5GAN3 156 aaKnown RBP12.25□□□□□ -0.45
SLIT3-201ENST00000332966 H3BUA1 57 aa12.25□□□□□ -0.45
SLIT3-201ENST00000332966 UBL5Q9BZL1 73 aa12.24□□□□□ -0.45
SLIT3-201ENST00000332966 NEXN-AS1Q8NBZ9 246 aa12.24□□□□□ -0.45
SLIT3-201ENST00000332966 PLXNB1O43157 2135 aa12.24□□□□□ -0.45
SLIT3-201ENST00000332966 COL6A6A6NMZ7 2263 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 PRR14LQ5THK1 2151 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 A0A0B4J2C4 111 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 CMC4P56277 68 aaPredicted RBP12.23□□□□□ -0.45
SLIT3-201ENST00000332966 Q8N1Y9 231 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 Q9H8V8 135 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 C10orf142B7Z368 130 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 PLA2G2CQ5R387 149 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 SEM1Q6ZVN7 128 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 IGHV3-16A0A0C4DH30 117 aa12.23□□□□□ -0.45
SLIT3-201ENST00000332966 HOXB4P17483 251 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms