RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 RS1O15537 224 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 H2AFB1P0C5Y9 115 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 CRIP1P50238 77 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 CFAP126Q5VTH2 177 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 Q86TA4 180 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 MBD3L1Q8WWY6 194 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 PTH2Q96A98 100 aa13.49□□□□□ -0.25
PDZRN3-202ENST00000308537 PGPEP1LA6NFU8 196 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 ORM1P02763 201 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 SRIP30626 198 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 ZNF876PQ49A33 203 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 CST9LP1Q5W188 147 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 SLC51BQ86UW2 128 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 WFDC10BQ8IUB3 73 aa13.48□□□□□ -0.25
PDZRN3-202ENST00000308537 PCLOQ9Y6V0 5065 aa13.47□□□□□ -0.25
PDZRN3-202ENST00000308537 ZNF506Q5JVG8 444 aa13.47□□□□□ -0.25
PDZRN3-202ENST00000308537 TNFRSF18Q9Y5U5 241 aa13.47□□□□□ -0.25
PDZRN3-202ENST00000308537 C9JCJ5 164 aa13.46□□□□□ -0.25
PDZRN3-202ENST00000308537 KRTAP10-2P60368 255 aa13.46□□□□□ -0.25
PDZRN3-202ENST00000308537 ZC2HC1AQ96GY0 325 aa13.46□□□□□ -0.25
PDZRN3-202ENST00000308537 SLC25A29Q8N8R3 303 aa13.45□□□□□ -0.26
PDZRN3-202ENST00000308537 DNAH10OSP0CZ25 163 aa13.44□□□□□ -0.26
PDZRN3-202ENST00000308537 TRBV6-1A0A0K0K1D8 114 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 FABP5P3A8MUU1 101 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 C16orf90A8MZG2 172 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 TIRAPP58753 221 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 UBE2G1P62253 170 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 DNLZQ5SXM8 178 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 Q6ZSN1 163 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 SPATA12Q7Z6I5 190 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 PCNPQ8WW12 178 aaKnown RBP13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 ABCA13Q86UQ4 5058 aa13.43□□□□□ -0.26
PDZRN3-202ENST00000308537 TRBV6-4A0A1B0GX49 114 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 PAGE4O60829 102 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 SULT1A2P50226 295 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 UFSP1Q6NVU6 142 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 FMC1Q96HJ9 113 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 TXNDC17Q9BRA2 123 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 KRTAP4-5Q9BYR2 181 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 ZFP30Q9Y2G7 519 aa13.42□□□□□ -0.26
PDZRN3-202ENST00000308537 A0A1B0GV50 99 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 KRBOX1C9JBD0 128 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 CIDEAO60543 219 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 LTAP01374 205 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 S100A9P06702 114 aaKnown RBP13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 PIK3CD-AS1Q5SR53 167 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 MANBALQ9NQG1 85 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 IL36BQ9NZH7 164 aa13.41□□□□□ -0.26
PDZRN3-202ENST00000308537 IGHV3-73A0A0B4J1V6 119 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 TRAV1-1A0A0B4J248 108 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 SH2D1AO60880 128 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 LINC00694P0DN24 101 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 AKR1C3P42330 323 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 ZNF674Q2M3X9 581 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 PARLQ9H300 379 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 JPT2Q9H910 190 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
PDZRN3-202ENST00000308537 RHOHQ15669 191 aa13.39□□□□□ -0.27
PDZRN3-202ENST00000308537 SCRT2Q9NQ03 307 aa13.39□□□□□ -0.27
PDZRN3-202ENST00000308537 Q9UF83 564 aa13.39□□□□□ -0.27
PDZRN3-202ENST00000308537 CDK2AP2O75956 126 aa13.38□□□□□ -0.27
PDZRN3-202ENST00000308537 IFNA1P01562 189 aa13.38□□□□□ -0.27
PDZRN3-202ENST00000308537 SH2D6Q7Z4S9 175 aa13.38□□□□□ -0.27
PDZRN3-202ENST00000308537 SAMD10Q9BYL1 202 aa13.38□□□□□ -0.27
PDZRN3-202ENST00000308537 B4DEV8 164 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 H3BVH4 76 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 K7EP13 123 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 MGST1P10620 155 aaKnown RBP13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 ASIPP42127 132 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 LINC01559Q495D7 138 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 ZFP2Q6ZN57 461 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 NHLRC2Q8NBF2 726 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 GNG13Q9P2W3 67 aa13.37□□□□□ -0.27
PDZRN3-202ENST00000308537 M0R036 132 aa13.36□□□□□ -0.27
PDZRN3-202ENST00000308537 ARMS2P0C7Q2 107 aa13.36□□□□□ -0.27
PDZRN3-202ENST00000308537 FAM162BQ5T6X4 162 aa13.36□□□□□ -0.27
PDZRN3-202ENST00000308537 MLST8Q9BVC4 326 aa13.36□□□□□ -0.27
PDZRN3-202ENST00000308537 A0A1B0GVG6 124 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 SCO2A0A1W2PP80 73 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 GRIFINA4D1Z8 144 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 A8MWV9 139 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 S100A4P26447 101 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 TAGLN2P37802 199 aaKnown RBP13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 PRADC1Q9BSG0 188 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 MSRB1Q9NZV6 116 aa13.35□□□□□ -0.27
PDZRN3-202ENST00000308537 LINC01556Q5JQF7 62 aa13.34□□□□□ -0.27
PDZRN3-202ENST00000308537 TRAV9-2A0A087WT02 112 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 IGHV3-38A0A0C4DH36 116 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 CRYGDP07320 174 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 EVI2AP22794 236 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 FUSP35637 526 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 BLOC1S1P78537 153 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 CCL20P78556 96 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 NFE4Q86UQ8 179 aa13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 C14orf178Q8N769 122 aaPredicted RBP13.33□□□□□ -0.28
PDZRN3-202ENST00000308537 FAT1Q14517 4588 aa13.32□□□□□ -0.28
PDZRN3-202ENST00000308537 A0A087WTM6 91 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms