RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CCL24O00175 119 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 A0A0J9YXV3 536 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 A4D1N5 150 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 H3BUA1 57 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 K7EQD1 137 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 GYPEP15421 78 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 WFDC9Q8NEX5 89 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 SND1-IT1Q9HBX3 110 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 GP9P14770 177 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 ESM1Q9NQ30 184 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 HIST2H2BCQ6DN03 193 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 TTTY13Q9BZ97 58 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 DOCK10Q96BY6 2186 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 RPL39P62891 51 aaKnown RBP14□□□□□ -0.17
COL5A3-201ENST00000264828 CAMK2N2Q96S95 79 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 FGF23Q9GZV9 251 aaPredicted RBP14□□□□□ -0.17
COL5A3-201ENST00000264828 KAAG1Q9UBP8 84 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 CHKB-CPT1BH3BT56 60 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 C1orf43Q9BWL3 253 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 ZMAT4Q9H898 229 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 A0A1B0GX51 115 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 FUSP35637 526 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL5A3-201ENST00000264828 FXYD2P54710 66 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 I3L2K1 104 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 ACYP1P07311 99 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 A0A0B4J2C4 111 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 FAM236AA0A1B0GUQ0 79 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 FAM236BA0A1B0GV22 79 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 IGHV4-38-2P0DP08 117 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 WFDC2Q14508 124 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 LINC01545Q5VT33 79 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 SMIM20Q8N5G0 67 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 PLA2G2EQ9NZK7 142 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 TIMM17AQ99595 171 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 AJUBAQ96IF1 538 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 PATE2Q6UY27 113 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 TIRAPP58753 221 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 NPBQ8NG41 125 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 CENPVL3A0A0U1RRI6 287 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 C8orf31Q8N9H6 132 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 COX7A2LO14548 114 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 GTSF1Q8WW33 167 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 PLXND1Q9Y4D7 1925 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 HEATR5AQ86XA9 2040 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 DOCK8Q8NF50 2099 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 K7EIM0 57 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 CLEC2BQ92478 149 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 PSMB8P28062 276 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 ATP6V0E2Q8NHE4 81 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 KIF26AQ9ULI4 1882 aaPredicted RBP13.95□□□□□ -0.18
COL5A3-201ENST00000264828 PRAC2D3DTV9 90 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 BAALCQ8WXS3 180 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 ZNF503Q96F45 646 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 C16orf74Q96GX8 76 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 LENEPQ9Y5L5 61 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 CADP27708 2225 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 WT1P19544 449 aaPredicted RBP13.95□□□□□ -0.18
COL5A3-201ENST00000264828 PIFOQ8TCI5 191 aa13.94□□□□□ -0.18
COL5A3-201ENST00000264828 LINC01620Q4KN68 170 aa13.94□□□□□ -0.18
COL5A3-201ENST00000264828 TMEM61Q8N0U2 210 aa13.93□□□□□ -0.18
COL5A3-201ENST00000264828 BLCAPP62952 87 aa13.93□□□□□ -0.18
COL5A3-201ENST00000264828 RNASE8Q8TDE3 154 aaKnown RBP13.93□□□□□ -0.18
COL5A3-201ENST00000264828 DOCK7Q96N67 2140 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 OPRPNQ99935 248 aaPredicted RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 Q8N1Y9 231 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ2Q13117 558 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 C14orf132Q9NPU4 83 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DEFB1P60022 68 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 CTSGP08311 255 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 C16orf54Q6UWD8 224 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
COL5A3-201ENST00000264828 H0YGX0 51 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 NREPQ16612 68 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 DOPEY2Q9Y3R5 2298 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 IGHV4-61A0A0C4DH41 118 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 LGALS9O00182 355 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 COA6Q5JTJ3 125 aaKnown RBP13.9□□□□□ -0.18
COL5A3-201ENST00000264828 ATOX1O00244 68 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TAX1BP3O14907 124 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TEN1Q86WV5 123 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 IGHV4OR15-8A0A075B7B6 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 A0A087WW49 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 LECT2O14960 151 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 FRMD6-AS1P0C7T7 363 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 MRPL23Q16540 153 aaKnown RBP13.89□□□□□ -0.19
COL5A3-201ENST00000264828 Q8NFD4 153 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 C9orf47Q6ZRZ4 202 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 SLX1AQ9BQ83 275 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
COL5A3-201ENST00000264828 DEFB4AO15263 64 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms