RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rsg1A2A825 258 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Znf431E9QAG8 526 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Scgb2b24Q7M747 112 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 BC049730Q810N3 246 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Pitpnc1Q8K4R4 332 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Slc31a2Q9CPU9 143 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Hdhd3Q9CYW4 251 aa18.51■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Esp8F7AMQ8 149 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Gm37988J3QM41 62 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Meox1P32442 253 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Usf2Q64705 346 aaKnown RBP18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Olfr1356Q7TQU8 320 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Celsr2Q9R0M0 2920 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Gm21778A0A087WNP8 232 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Prss2P07146 246 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Ucp1P12242 307 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Ighv3-6P18531 116 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 CapgP24452 352 aaKnown RBP18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Lclat1Q3UN02 376 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Q3UUX7 111 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Psmb6Q60692 238 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Bpifb3Q80ZU7 473 aa18.5■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Unc79Q0KK59 2596 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Pglyrp3A1A547 347 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Gm14408E9Q6B9 136 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Pet117P0DJF2 80 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Cdkn2aQ64364 169 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Znrf2Q71FD5 238 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Zfp459Q8BZ17 267 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 FuomQ8R2K1 153 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Olfr303Q8VFP0 319 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Slc25a2Q99ML6 265 aa18.49■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Ighv5-12-4A0A0A6YWG4 117 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 TcapO70548 167 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Cst7O89098 144 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 P01728 117 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 TymsP07607 307 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Sap30lQ5SQF8 182 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Psg22Q810J1 475 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 OtosQ8R448 89 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Olfr786Q8VFH8 312 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Olfr1294Q8VGE5 312 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 PigcQ9CXR4 297 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Cacna1iE9Q7P2 2199 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Ighv1-7A0A075B5T7 117 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 4930444P10RikD3YUR1 185 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 SncaO55042 140 aaKnown RBP18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Cldn1O88551 211 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 LalbaP29752 143 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Vwc2lQ505H4 222 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Prickle3Q80VL3 624 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 4922502D21RikQ8C634 189 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Tmem170aQ9D342 144 aa18.48■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Klrd1O54707 179 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Klk1b22P15948 259 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 KncnQ307W7 124 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Q8C708 225 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Acaa1aQ921H8 424 aaKnown RBP18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Tmem167aQ9CR64 72 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Atp6v1fQ9D1K2 119 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 4933407L21RikQ9D476 131 aa18.47■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Cdc34bA0A140T8I4 237 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Gm20830J3KML6 227 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Gm10447Q3UQ92 135 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Chrdl1Q920C1 447 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Vamp5Q9Z2P8 102 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Hist1h2bfP10853 126 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Q504N7 393 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Hist1h2bbQ64475 126 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Olfr907Q7TRC7 310 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Klhdc1Q80YG3 406 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Hist1h2bkQ8CGP1 126 aaKnown RBP18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Hist1h2bpQ8CGP2 126 aaKnown RBP18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Sval2Q99N75 144 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Zcchc10Q9CX48 178 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Pdzd11Q9CZG9 140 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Fbxo25Q9D2Y6 357 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Trex2Q9R1A9 236 aa18.46■□□□□ 0.55
Upf3a-201ENSMUST00000043767 Ighv4-1A0A075B5R5 116 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Vmn1r60G3UY47 300 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 CntfrO88507 372 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Hspb7P35385 169 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Defb2P82020 71 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 B020031M17RikQ3UT11 173 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Tbpl2Q6SJ95 350 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Neil3Q8K203 606 aaKnown RBP18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Olfr362Q8VGV7 317 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Srd5a2Q99N99 254 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Xrcc3Q9CXE6 349 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Tbx21Q9JKD8 530 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Abca2P41234 2434 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Trav6-1A0A075B5Z8 112 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Olfr709-ps1A0A140T8J9 307 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Olfr556E9Q549 324 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 P01803 113 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Morn2Q6UL01 79 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 HaaoQ78JT3 286 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Znrd1Q791N7 123 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 Znhit3Q9CQK1 151 aa18.45■□□□□ 0.54
Upf3a-201ENSMUST00000043767 H2al3Q9D4U4 128 aa18.45■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms