RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 TOMM6Q96B49 74 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 MTCL1Q9Y4B5 1905 aaKnown RBP8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 CLPSP04118 112 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 FOXL2NBQ6ZUU3 175 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 MKI67P46013 3256 aaKnown RBP8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 A0A0J9YXV3 536 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 SERP2Q8N6R1 65 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 Q9HAA7 133 aa8.59□□□□□ -1.03
KCNMA1-259ENST00000639406 C11orf86A6NJI1 115 aa8.59□□□□□ -1.04
KCNMA1-259ENST00000639406 ELANEP08246 267 aa8.59□□□□□ -1.04
KCNMA1-259ENST00000639406 DEFB130BP0DP73 79 aa8.59□□□□□ -1.04
KCNMA1-259ENST00000639406 DEFB130AP0DP74 79 aa8.59□□□□□ -1.04
KCNMA1-259ENST00000639406 UBE2E1P51965 193 aa8.59□□□□□ -1.04
KCNMA1-259ENST00000639406 PINLYPA6NC86 204 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 COX7CP15954 63 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 RALGAPA1Q6GYQ0 2036 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 OVOL3O00110 214 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 CTRLP40313 264 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 ZFP36L1Q07352 338 aaKnown RBP8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 XGP55808 180 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 ZNF833PQ6ZTB9 187 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 LRRK1Q38SD2 2015 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 IGLV3-12A0A075B6K2 115 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 DEFB131AP59861 70 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 WT1-ASQ06250 92 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 ZNF503Q96F45 646 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 DENND4AQ7Z401 1863 aa8.58□□□□□ -1.04
KCNMA1-259ENST00000639406 TMEM256-PLSCR3K7ERE1 68 aa8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 GNRH2O43555 120 aa8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 NSUN5P1Q3KNT7 163 aa8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 ARTNQ5T4W7 220 aa8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 FAM110DQ8TAY7 271 aaPredicted RBP8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 SPRR3Q9UBC9 169 aa8.57□□□□□ -1.04
KCNMA1-259ENST00000639406 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 ENHOQ6UWT2 76 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 PRSS33Q8NF86 280 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 IMUPQ9GZP8 106 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 MSRB1Q9NZV6 116 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 ZMAT4Q9H898 229 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 VCANP13611 3396 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 CABIN1Q9Y6J0 2220 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 CD59P13987 128 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 LMO1P25800 156 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 HIST2H2BCQ6DN03 193 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 PIP4P2Q8N4L2 257 aa8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 TDRD15B5MCY1 1934 aaKnown RBP8.56□□□□□ -1.04
KCNMA1-259ENST00000639406 KIF26BQ2KJY2 2108 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 ETV2O00321 342 aaPredicted RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 PSCAO43653 123 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 DAZ2Q13117 558 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 DAZ4Q86SG3 579 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 DAZ3Q9NR90 486 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 NYNRINQ9P2P1 1898 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 HIGD2BQ4VC39 106 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 ATP5EP2Q5VTU8 51 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 NDUFC1O43677 76 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 CSDC2Q9Y534 153 aaKnown RBP8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 XCL2Q9UBD3 114 aa8.55□□□□□ -1.04
KCNMA1-259ENST00000639406 XCL1P47992 114 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 RPL18AQ02543 176 aaKnown RBP8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 SEC61GP60059 68 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 CLPSL2Q6UWE3 100 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 LYPD2Q6UXB3 125 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 SPRY2O43597 315 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 MRPL53Q96EL3 112 aaKnown RBP8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 IGKV2D-26A0A0A0MRZ7 120 aa8.54□□□□□ -1.04
KCNMA1-259ENST00000639406 K7ENP7 123 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 NDUFB1O75438 58 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 SNURFQ9Y675 71 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 ZNF672Q499Z4 452 aaPredicted RBP8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 C11orf44Q8N8P7 122 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 ADAMTS7Q9UKP4 1686 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 A6NED7 52 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 C17orf58Q2M2W7 97 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 ADAMTSL1Q8N6G6 1762 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 ATP6V0E1O15342 81 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 PDE6GP18545 87 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 NFE4Q86UQ8 179 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 ZNF491Q8N8L2 437 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 MDS2Q8NDY4 140 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 AGPAT4-IT1Q9H0P7 198 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 TPSG1Q9NRR2 321 aa8.53□□□□□ -1.04
KCNMA1-259ENST00000639406 COX7A2LO14548 114 aa8.52□□□□□ -1.04
KCNMA1-259ENST00000639406 RP1P56715 2156 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 LYRM9A8MSI8 78 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 NCR3O14931 201 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 FREM3P0C091 2139 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 VPREB3Q9UKI3 123 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 SCN5AQ14524 2016 aa8.52□□□□□ -1.05
KCNMA1-259ENST00000639406 A0A0G2JMZ2 1700 aa8.51□□□□□ -1.05
KCNMA1-259ENST00000639406 LRRC37A2A6NM11 1700 aa8.51□□□□□ -1.05
KCNMA1-259ENST00000639406 LRRC37AA6NMS7 1700 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms