RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 SCN1AP35498 2009 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 IGHV3-43A0A0B4J1X8 118 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 M0R233 179 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 YPEL1O60688 119 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 SLC25A14O95258 325 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-213ENST00000630925 GYPAP02724 150 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 COX6A1P12074 109 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 CCL4P13236 92 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ZNF414Q96IQ9 312 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 OSTCQ9NRP0 149 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ATMQ13315 3056 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 PTPRQQ9UMZ3 2332 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 LRBAP50851 2863 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 TRIP12Q14669 1992 aaPredicted RBP3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ASXL3Q9C0F0 2248 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
SDCBP-213ENST00000630925 PLIN4Q96Q06 1357 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 OTOGQ6ZRI0 2925 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 IGLV3-9A0A075B6K5 115 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ZFP92A6NM28 416 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 HYPMO75409 117 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 IGLV2-14P01704 120 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 TSPEAR-AS2P59090 65 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 MRPS36P82909 103 aaKnown RBP3.42□□□□□ -1.86
SDCBP-213ENST00000630925 FHL2Q14192 279 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 DPPA3Q6W0C5 159 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ZFAND2AQ8N6M9 145 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 VSTM2AQ8TAG5 236 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 TMEM204Q9BSN7 226 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 ST20Q9HBF5 79 aa3.42□□□□□ -1.86
SDCBP-213ENST00000630925 CSMD1Q96PZ7 3565 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 SPENQ96T58 3664 aaKnown RBP3.41□□□□□ -1.86
SDCBP-213ENST00000630925 FLNCQ14315 2725 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 TANC2Q9HCD6 1990 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
SDCBP-213ENST00000630925 PINLYPA6NC86 204 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 GNGT2O14610 69 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 SSSCA1O60232 199 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 HMGN3Q15651 99 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 LGALSLQ3ZCW2 172 aaPredicted RBP3.41□□□□□ -1.86
SDCBP-213ENST00000630925 RNASE13Q5GAN3 156 aaKnown RBP3.41□□□□□ -1.86
SDCBP-213ENST00000630925 SOSTDC1Q6X4U4 206 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 Q8NBF4 154 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 CLDND2Q8NHS1 167 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 ZNF714Q96N38 554 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 TTTY13Q9BZ97 58 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 DEC1Q9P2X7 70 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 APC2O95996 2303 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 NAV3Q8IVL0 2385 aa3.41□□□□□ -1.86
SDCBP-213ENST00000630925 A0A087WXM4 84 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 H3BRM9 83 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 PROSCO94903 275 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 SHBGP04278 402 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 CD28P10747 220 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 CBLN1P23435 193 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 NPPCP23582 126 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 COL8A2P25067 703 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 NOVP48745 357 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 POLR2JP52435 117 aaKnown RBP3.4□□□□□ -1.86
SDCBP-213ENST00000630925 LINC01547P58512 204 aaPredicted RBP3.4□□□□□ -1.86
SDCBP-213ENST00000630925 CDK5R1Q15078 307 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 MRPL51Q4U2R6 128 aaKnown RBP3.4□□□□□ -1.86
SDCBP-213ENST00000630925 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 FAM72BQ86X60 149 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 AMELYQ99218 206 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 ITPR2Q14571 2701 aa3.4□□□□□ -1.86
SDCBP-213ENST00000630925 ZFC3H1O60293 1989 aaKnown RBP3.4□□□□□ -1.86
SDCBP-213ENST00000630925 CCDC88CQ9P219 2028 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 A6NN06 94 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 A8MWL6 223 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF737O75373 536 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 CCL3P10147 92 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 UBE2AP49459 152 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 BLCAPP62952 87 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 ADIRFQ15847 76 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 MIR17HGQ75NE6 70 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 OR5AS1Q8N127 324 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 C1orf147Q96MC9 270 aaPredicted RBP3.4□□□□□ -1.87
SDCBP-213ENST00000630925 TNFRSF19Q9NS68 423 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 Q9Y3F1 56 aa3.4□□□□□ -1.87
SDCBP-213ENST00000630925 A0A087X002 238 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV7-4-1A0A0J9YVY3 117 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 C3orf84H3BNL1 204 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 NANOS3P60323 173 aaKnown RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 HIST1H4AP62805 103 aaKnown RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 SEC11AP67812 179 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 BVES-AS1Q5T3Y7 98 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 C9orf57Q5W0N0 161 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 NOXRED1Q6NXP6 359 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 DEFB124Q8NES8 71 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 TMEM190Q8WZ59 177 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 IMMP2LQ96T52 175 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 CACFD1Q9UGQ2 172 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 PCNX1Q96RV3 2341 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 USP9YO00507 2555 aaPredicted RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms