RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 ZFAND2AQ8N6M9 145 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 ODF3Q96PU9 254 aa6.65□□□□□ -1.35
CCDC47-207ENST00000612558 SPAG8Q99932 426 aaPredicted RBP6.65□□□□□ -1.35
CCDC47-207ENST00000612558 TMSB15BA0A087X1C1 80 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 TRAV21A0A0B4J279 112 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 OR4C46A6NHA9 309 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 DUSP14O95147 198 aaKnown RBP6.64□□□□□ -1.35
CCDC47-207ENST00000612558 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 SNRPEP62304 92 aaKnown RBP6.64□□□□□ -1.35
CCDC47-207ENST00000612558 HBBP68871 147 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 GDF5OSQ5U4N7 250 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.64□□□□□ -1.35
CCDC47-207ENST00000612558 BORCS7Q96B45 105 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 AGRNO00468 2067 aa6.64□□□□□ -1.35
CCDC47-207ENST00000612558 NIPBLQ6KC79 2804 aaeCLIP6.63□□□□□ -1.35
CCDC47-207ENST00000612558 IGKV3D-20A0A0C4DH25 116 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 A0A1B0GUT8 65 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 A0A1B0GW15 77 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 KLLNB2CW77 178 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 LEPP41159 167 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 CAMPP49913 170 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 NDUFA6P56556 154 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 DEFB131AP59861 70 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 RIGQ13278 110 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 PRR9Q5T870 116 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 TPPP3Q9BW30 176 aa6.63□□□□□ -1.35
CCDC47-207ENST00000612558 ZNF256Q9Y2P7 627 aaPredicted RBP6.63□□□□□ -1.35
CCDC47-207ENST00000612558 CYSRT1A8MQ03 144 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 J3KRW8 73 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 SAP30O75446 220 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 APCSP02743 223 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 PF4P02776 101 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 S100A8P05109 93 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 IGLC6P0CF74 106 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 TSPOP30536 169 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 RNASE4P34096 147 aaKnown RBP6.62□□□□□ -1.35
CCDC47-207ENST00000612558 LYZL1Q6UWQ5 148 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 FER1L6-AS1Q8NA97 138 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
CCDC47-207ENST00000612558 GRIFINA4D1Z8 144 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 F2Z2F3 143 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 ARMS2P0C7Q2 107 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 CTRLP40313 264 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 OR2K2Q8NGT1 345 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 MAP6D1Q9H9H5 199 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 H3BMM0 161 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 UBE2CO00762 179 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 IGKV3-20P01619 116 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 IGLV1-51P01701 117 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 HLA-DRB4P13762 266 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 HOXA5P20719 270 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 CDKN1BP46527 198 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
CCDC47-207ENST00000612558 SLAQ13239 276 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 COA6Q5JTJ3 125 aaKnown RBP6.61□□□□□ -1.35
CCDC47-207ENST00000612558 Q6ZQT7 251 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 LINC00482Q8N8I6 264 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 CITED1Q99966 193 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 TEP1Q99973 2627 aaKnown RBP6.61□□□□□ -1.35
CCDC47-207ENST00000612558 HLA-DRB4X5D2U9 266 aa6.61□□□□□ -1.35
CCDC47-207ENST00000612558 ATRQ13535 2644 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 C7orf71A4D174 169 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 KNCNA6PVL3 124 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 A8MTW9 85 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 AMTNQ6UX39 209 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 GATD1Q8NB37 220 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 C19orf73Q9NVV2 129 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 NAGKQ9UJ70 344 aa6.6□□□□□ -1.35
CCDC47-207ENST00000612558 ZNF324O75467 553 aaPredicted RBP6.59□□□□□ -1.35
CCDC47-207ENST00000612558 ODF3L2Q3SX64 289 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 KIAA1644Q3SXP7 199 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 ANXA2RQ3ZCQ2 193 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 ZNF493Q6ZR52 646 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 KCNS1Q96KK3 526 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 CLUHP3Q96NS8 147 aa6.59□□□□□ -1.35
CCDC47-207ENST00000612558 TRAV12-3A0A0B4J271 114 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 OR11H12B2RN74 326 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 M0R2Z0 102 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 SNAI2O43623 268 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 OR5AL1P0C617 328 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 NTF3P20783 257 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 SRIP30626 198 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 SSTP61278 116 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 Q0VG73 95 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 TWIST1Q15672 202 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 SPINK13Q1W4C9 94 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 MUC21Q5SSG8 566 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 DNLZQ5SXM8 178 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 GFI1BQ5VTD9 330 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 FAM159AQ6UWV7 190 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 FAM110AQ9BQ89 295 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
CCDC47-207ENST00000612558 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms