RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 C3orf56Q8N813 242 aa2.47□□□□□ -2.01
LINC00458-206ENST00000607494 SLC30A7Q8NEW0 376 aa2.47□□□□□ -2.01
LINC00458-206ENST00000607494 RNASE11Q8TAA1 199 aaKnown RBP2.47□□□□□ -2.01
LINC00458-206ENST00000607494 TMEM106BQ9NUM4 274 aa2.47□□□□□ -2.01
LINC00458-206ENST00000607494 COL12A1Q99715 3063 aa2.47□□□□□ -2.01
LINC00458-206ENST00000607494 KIAA2026Q5HYC2 2103 aa2.47□□□□□ -2.01
LINC00458-206ENST00000607494 SPTBN1Q01082 2364 aaKnown RBP2.46□□□□□ -2.01
LINC00458-206ENST00000607494 C2CD3Q4AC94 2353 aa2.46□□□□□ -2.01
LINC00458-206ENST00000607494 MEIKINA0A087WXM9 373 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 RHOGP84095 191 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 SOSTDC1Q6X4U4 206 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 IFT20Q8IY31 132 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 LINC00471Q8N535 108 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
LINC00458-206ENST00000607494 MBD3L1Q8WWY6 194 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 EFCAB11Q9BUY7 163 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 BCL2L10Q9HD36 194 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 ZFC3H1O60293 1989 aaKnown RBP2.46□□□□□ -2.02
LINC00458-206ENST00000607494 NCKAP5O14513 1909 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 ITPR2Q14571 2701 aa2.46□□□□□ -2.02
LINC00458-206ENST00000607494 RP1P56715 2156 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 FUOMA2VDF0 154 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 C10orf142B7Z368 130 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 UBBP0CG47 229 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 MYL5Q02045 173 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 ELOBQ15370 118 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 RTL8BQ17RB0 113 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 C1orf140Q5VVS0 124 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 SAMD13Q5VXD3 122 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 CROCCP2Q86T23 111 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 SKA2Q8WVK7 121 aaPredicted RBP2.45□□□□□ -2.02
LINC00458-206ENST00000607494 SLC50A1Q9BRV3 221 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 LRTM1Q9HBL6 345 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 POPDC3Q9HBV1 291 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 NUBP2Q9Y5Y2 271 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 U3KQA8 63 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 NBPF19A0A087WUL8 3843 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 MPDZO75970 2070 aa2.45□□□□□ -2.02
LINC00458-206ENST00000607494 SCN8AQ9UQD0 1980 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 BAALC-AS2P0C853 105 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 PLCXD2Q0VAA5 305 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 ZNF846Q147U1 533 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 SURF2Q15527 256 aaPredicted RBP2.44□□□□□ -2.02
LINC00458-206ENST00000607494 ESRGQ1W209 222 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 SLC25A21Q9BQT8 299 aaPredicted RBP2.44□□□□□ -2.02
LINC00458-206ENST00000607494 NPCDR1Q9BY65 106 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 HSPB11Q9Y547 144 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 MED13Q9UHV7 2174 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 FBN2P35556 2912 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 ITPR3Q14573 2671 aa2.44□□□□□ -2.02
LINC00458-206ENST00000607494 TRAV1-1A0A0B4J248 108 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 FAM92AA1XBS5 289 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 MGST1P10620 155 aaKnown RBP2.43□□□□□ -2.02
LINC00458-206ENST00000607494 MIFP14174 115 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 Q1T7F1 81 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 EIF5AL1Q6IS14 154 aaKnown RBP2.43□□□□□ -2.02
LINC00458-206ENST00000607494 OR4C6Q8NH72 309 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 THEM6Q8WUY1 208 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 ISOC1Q96CN7 298 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 CARD19Q96LW7 228 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 LINC00467Q9BRT7 94 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
LINC00458-206ENST00000607494 POLQO75417 2590 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 LRBAP50851 2863 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
LINC00458-206ENST00000607494 CCDC88CQ9P219 2028 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 CENPEQ02224 2701 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 F8P00451 2351 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 TRAV3A0A0B4J244 114 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 A8MWV9 139 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 TIMM17BO60830 172 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 TNFSF15O95150 251 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 FAM107AO95990 144 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 CXCL1P09341 107 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 GPX2P18283 190 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 AKR1C3P42330 323 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 TMBIM6P55061 237 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 ZNF720Q7Z2F6 126 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 ANGPTL5Q86XS5 388 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 KRTAP13-1Q8IUC0 172 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 PRR15Q8IV56 129 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 BORCS8Q96FH0 119 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 HS3ST2Q9Y278 367 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 BSNQ9UPA5 3926 aa2.42□□□□□ -2.02
LINC00458-206ENST00000607494 SETD2Q9BYW2 2564 aaPredicted RBP2.41□□□□□ -2.02
LINC00458-206ENST00000607494 TRAV5A0A0B4J249 113 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 LOC105371267A0A1B0GV96 52 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 TRDV1A0A1B0GX56 115 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 ODAMA1E959 279 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 GADD45GO95257 159 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 C12orf29Q8N999 325 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 OR9Q1Q8NGQ5 310 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 BATF3Q9NR55 127 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 LAMTOR2Q9Y2Q5 125 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 ASB4Q9Y574 426 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 HIVEP3Q5T1R4 2406 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 DOCK4Q8N1I0 1966 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 UNC13CQ8NB66 2214 aa2.41□□□□□ -2.02
LINC00458-206ENST00000607494 RELNP78509 3460 aa2.4□□□□□ -2.02
LINC00458-206ENST00000607494 UBL3O95164 117 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms