RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TVP23CQ96ET8 276 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
IRF3-208ENST00000594387 HHLA3Q9XRX5 114 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 ICOSQ9Y6W8 199 aa12.09□□□□□ -0.47
IRF3-208ENST00000594387 M0R2P5 195 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 SEC11BP0C7V7 166 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 Q6ZR54 194 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 ZNRF2Q8NHG8 242 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 RASL10AQ92737 203 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 C8orf49Q96NF6 230 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 Q9H8V8 135 aa12.08□□□□□ -0.48
IRF3-208ENST00000594387 UMAD1C9J7I0 102 aa12.07□□□□□ -0.48
IRF3-208ENST00000594387 TYMSP04818 313 aa12.07□□□□□ -0.48
IRF3-208ENST00000594387 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
IRF3-208ENST00000594387 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
IRF3-208ENST00000594387 PCNPQ8WW12 178 aaKnown RBP12.07□□□□□ -0.48
IRF3-208ENST00000594387 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
IRF3-208ENST00000594387 IGHV3-16A0A0C4DH30 117 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 NBDYA0A0U1RRE5 68 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 FAM74A7A6NL05 159 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 BCL2L11O43521 198 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 MRPL23Q16540 153 aaKnown RBP12.06□□□□□ -0.48
IRF3-208ENST00000594387 ESRGQ1W209 222 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 CST9LP1Q5W188 147 aa12.06□□□□□ -0.48
IRF3-208ENST00000594387 PEX7O00628 323 aa12.05□□□□□ -0.48
IRF3-208ENST00000594387 CRYBA4P53673 196 aa12.05□□□□□ -0.48
IRF3-208ENST00000594387 UBE2G1P62253 170 aa12.05□□□□□ -0.48
IRF3-208ENST00000594387 FHL2Q14192 279 aa12.05□□□□□ -0.48
IRF3-208ENST00000594387 TTC32Q5I0X7 151 aa12.05□□□□□ -0.48
IRF3-208ENST00000594387 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 A0A096LPF7 62 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 TRAV34A0A0B4J273 112 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 FABP5P3A8MUU1 101 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 RTL8CO15255 209 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 IGLV2-11P01706 119 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 ORM1P02763 201 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 TPT1P13693 172 aaKnown RBP12.04□□□□□ -0.48
IRF3-208ENST00000594387 DPPA3Q6W0C5 159 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 OR11H4Q8NGC9 324 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 SFT2D1Q8WV19 159 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 TCEAL7Q9BRU2 100 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 MRPS16Q9Y3D3 137 aaKnown RBP12.04□□□□□ -0.48
IRF3-208ENST00000594387 ARL2-SNX15V9GYD0 113 aa12.04□□□□□ -0.48
IRF3-208ENST00000594387 C9JCJ5 164 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 SFTA3P0C7M3 94 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 S100A4P26447 101 aaKnown RBP12.03□□□□□ -0.48
IRF3-208ENST00000594387 FHITP49789 147 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 ZNF80P51504 273 aaPredicted RBP12.03□□□□□ -0.48
IRF3-208ENST00000594387 TMUB2Q71RG4 321 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 FMC1Q96HJ9 113 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 ZNF479Q96JC4 524 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 LINC00479Q96M42 142 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 UPK3BQ9BT76 320 aa12.03□□□□□ -0.48
IRF3-208ENST00000594387 CIDEAO60543 219 aa12.02□□□□□ -0.49
IRF3-208ENST00000594387 SRIP30626 198 aa12.02□□□□□ -0.49
IRF3-208ENST00000594387 EIF5AL1Q6IS14 154 aaKnown RBP12.02□□□□□ -0.49
IRF3-208ENST00000594387 NEGR1Q7Z3B1 354 aa12.02□□□□□ -0.49
IRF3-208ENST00000594387 C6orf223Q8N319 242 aa12.02□□□□□ -0.49
IRF3-208ENST00000594387 ZFP30Q9Y2G7 519 aa12.02□□□□□ -0.49
IRF3-208ENST00000594387 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
IRF3-208ENST00000594387 LGALSLQ3ZCW2 172 aaPredicted RBP12.01□□□□□ -0.49
IRF3-208ENST00000594387 ZNF876PQ49A33 203 aa12.01□□□□□ -0.49
IRF3-208ENST00000594387 MBD3L1Q8WWY6 194 aa12.01□□□□□ -0.49
IRF3-208ENST00000594387 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
IRF3-208ENST00000594387 EPPK1P58107 5090 aaKnown RBP12□□□□□ -0.49
IRF3-208ENST00000594387 A0A1W2PPQ1 181 aa12□□□□□ -0.49
IRF3-208ENST00000594387 TEX46H3BTG2 121 aa12□□□□□ -0.49
IRF3-208ENST00000594387 PAGE4O60829 102 aa12□□□□□ -0.49
IRF3-208ENST00000594387 AKR1C3P42330 323 aa12□□□□□ -0.49
IRF3-208ENST00000594387 Q86TA4 180 aa12□□□□□ -0.49
IRF3-208ENST00000594387 A0A1B0GV50 99 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 SIVA1O15304 175 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 S100A9P06702 114 aaKnown RBP11.99□□□□□ -0.49
IRF3-208ENST00000594387 GYPEP15421 78 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 ASIPP42127 132 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 SH2D6Q7Z4S9 175 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 VPS13DQ5THJ4 4388 aa11.99□□□□□ -0.49
IRF3-208ENST00000594387 LYPD5Q6UWN5 251 aa11.98□□□□□ -0.49
IRF3-208ENST00000594387 C11orf21Q9P2W6 132 aa11.98□□□□□ -0.49
IRF3-208ENST00000594387 B4DEV8 164 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 K7EQD1 137 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 RAB5CP51148 216 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 FAM162BQ5T6X4 162 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 PTH2Q96A98 100 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 C9orf85Q96MD7 179 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 PRADC1Q9BSG0 188 aa11.97□□□□□ -0.49
IRF3-208ENST00000594387 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.49
IRF3-208ENST00000594387 NXPH4O95158 308 aa11.96□□□□□ -0.49
IRF3-208ENST00000594387 BTF3P20290 206 aaKnown RBP11.96□□□□□ -0.49
IRF3-208ENST00000594387 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.49
IRF3-208ENST00000594387 NHLRC2Q8NBF2 726 aa11.96□□□□□ -0.49
IRF3-208ENST00000594387 TRBV6-1A0A0K0K1D8 114 aa11.95□□□□□ -0.5
IRF3-208ENST00000594387 RS1O15537 224 aa11.95□□□□□ -0.5
IRF3-208ENST00000594387 SYT8Q8NBV8 401 aa11.95□□□□□ -0.5
IRF3-208ENST00000594387 ZC2HC1AQ96GY0 325 aa11.95□□□□□ -0.5
IRF3-208ENST00000594387 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
IRF3-208ENST00000594387 A0A1B0GVY2 172 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms