RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 C8orf49Q96NF6 230 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 SPXQ9BT56 116 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
BRCA1-227ENST00000591849 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
BRCA1-227ENST00000591849 ALMS1Q8TCU4 4167 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 TRAV26-1A0A087WT03 109 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 GNRH2O43555 120 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 SPINK4O60575 86 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 IGHV3-53P01767 116 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 AKR1C3P42330 323 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 RAB5CP51148 216 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 LGALS9BQ3B8N2 356 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 SLC51BQ86UW2 128 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 LINC00612Q8N6U2 182 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 LINC00479Q96M42 142 aa7.09□□□□□ -1.27
BRCA1-227ENST00000591849 A0A1B0GVG6 124 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 FABP5P3A8MUU1 101 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 PFN1P07737 140 aaKnown RBP7.08□□□□□ -1.28
BRCA1-227ENST00000591849 CCL18P55774 89 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 RNF212Q495C1 297 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 FMC1Q96HJ9 113 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 TCEAL7Q9BRU2 100 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 ZFP30Q9Y2G7 519 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 ARL2-SNX15V9GYD0 113 aa7.08□□□□□ -1.28
BRCA1-227ENST00000591849 TRGV4A0A0C4DH28 118 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 M0R2P5 195 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 IGLV2-11P01706 119 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 S100A9P06702 114 aaKnown RBP7.07□□□□□ -1.28
BRCA1-227ENST00000591849 HOXA5P20719 270 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
BRCA1-227ENST00000591849 SLAQ13239 276 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 GNG13Q9P2W3 67 aa7.07□□□□□ -1.28
BRCA1-227ENST00000591849 PLECQ15149 4684 aaKnown RBP7.06□□□□□ -1.28
BRCA1-227ENST00000591849 IGHV3-16A0A0C4DH30 117 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 C9JCJ5 164 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 M0R2N4 97 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 PAX4O43316 350 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 IFNA1P01562 189 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 ORM1P02763 201 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 TYMSP04818 313 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-227ENST00000591849 Q86TA4 180 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 OR4C5Q8NGB2 326 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 C18orf15Q96N68 181 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 MANBALQ9NQG1 85 aa7.06□□□□□ -1.28
BRCA1-227ENST00000591849 IGLV2-18A0A075B6J9 118 aa7.05□□□□□ -1.28
BRCA1-227ENST00000591849 SULT1A2P50226 295 aa7.05□□□□□ -1.28
BRCA1-227ENST00000591849 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
BRCA1-227ENST00000591849 PCNPQ8WW12 178 aaKnown RBP7.05□□□□□ -1.28
BRCA1-227ENST00000591849 RASL10AQ92737 203 aa7.05□□□□□ -1.28
BRCA1-227ENST00000591849 PRO0255Q9UI72 69 aa7.05□□□□□ -1.28
BRCA1-227ENST00000591849 HHLA3Q9XRX5 114 aa7.05□□□□□ -1.28
BRCA1-227ENST00000591849 FRAS1Q86XX4 4008 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 B4DEV8 164 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 H3BNG1 76 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 SFTA3P0C7M3 94 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 ASIPP42127 132 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 CCL20P78556 96 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 ZNF876PQ49A33 203 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 FAM162BQ5T6X4 162 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 C9orf62Q8N4C0 152 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 C11orf21Q9P2W6 132 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 ICOSQ9Y6W8 199 aa7.04□□□□□ -1.28
BRCA1-227ENST00000591849 TRAV1-1A0A0B4J248 108 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 TRAV4A0A0B4J268 109 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 TRBV6-1A0A0K0K1D8 114 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 SCO2A0A1W2PP80 73 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 M0R036 132 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 SH2D1AO60880 128 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 FHL2Q14192 279 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 MRPL23Q16540 153 aaKnown RBP7.03□□□□□ -1.28
BRCA1-227ENST00000591849 BAGE2Q86Y30 109 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 NHLRC2Q8NBF2 726 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 ZC2HC1AQ96GY0 325 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 ZNF479Q96JC4 524 aa7.03□□□□□ -1.28
BRCA1-227ENST00000591849 TMSB15BA0A087X1C1 80 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 LTAP01374 205 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 CRYBA4P53673 196 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 BLOC1S1P78537 153 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 VSIG2Q96IQ7 327 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 TXNDC17Q9BRA2 123 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 LINC00588Q9Y4M8 146 aa7.02□□□□□ -1.29
BRCA1-227ENST00000591849 IGKV3D-20A0A0C4DH25 116 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 GRIFINA4D1Z8 144 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 SRIP30626 198 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 NKX2-5P52952 324 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-227ENST00000591849 SOHLH1Q5JUK2 328 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 PRR27Q6MZM9 219 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 SYT8Q8NBV8 401 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 DAZAP1Q96EP5 407 aaKnown RBP7.01□□□□□ -1.29
BRCA1-227ENST00000591849 MED9Q9NWA0 146 aa7.01□□□□□ -1.29
BRCA1-227ENST00000591849 A0A096LPF7 62 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 IGHV3-73A0A0B4J1V6 119 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 PGPEP1LA6NFU8 196 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 KRBOX1C9JBD0 128 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 PDE6DO43924 150 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 CIDEAO60543 219 aa7□□□□□ -1.29
BRCA1-227ENST00000591849 MGST1P10620 155 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms