RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 A0A087WWL8 130 aa5.57□□□□□ -1.52
CNOT1-216ENST00000569240 SCN5AQ14524 2016 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 AGPAT4-IT1Q9H0P7 198 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 LST1O00453 97 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 NEXN-AS1Q8NBZ9 246 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 IGLV3-9A0A075B6K5 115 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 IGKV3D-7A0A0C4DH55 119 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 A0A0J9YY99 117 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 COL8A2P25067 703 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 DAZ2Q13117 558 aaKnown RBP5.56□□□□□ -1.52
CNOT1-216ENST00000569240 MLANAQ16655 118 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 DAZ4Q86SG3 579 aaKnown RBP5.56□□□□□ -1.52
CNOT1-216ENST00000569240 C20orf197Q8N268 126 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 DAZ3Q9NR90 486 aaKnown RBP5.56□□□□□ -1.52
CNOT1-216ENST00000569240 ZNF581Q9P0T4 197 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 TINCRA0A1B0GVN0 87 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 RALGAPA1Q6GYQ0 2036 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 KIAA0100Q14667 2235 aaKnown RBP5.56□□□□□ -1.52
CNOT1-216ENST00000569240 S4R3C0 116 aa5.56□□□□□ -1.52
CNOT1-216ENST00000569240 WI2-2373I1.2A0A1W2PRP0 233 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 E9PLN8 166 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 BLCAPP62952 87 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 C20orf203Q8NBC4 194 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 ODF3Q96PU9 254 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 UPK3BQ9BT76 320 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 CSDC2Q9Y534 153 aaKnown RBP5.55□□□□□ -1.52
CNOT1-216ENST00000569240 PLXNA4Q9HCM2 1894 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 IGLV1-44P01699 117 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 GATA3P23771 443 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 PATE2Q6UY27 113 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 TRGV1A0A0A0MS02 117 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 TRBV7-7A0A0K0K1E9 115 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 UBE2E1P51965 193 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 DOCK9Q9BZ29 2069 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 TMEM61Q8N0U2 210 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 YLPM1P49750 1951 aaKnown RBP5.55□□□□□ -1.52
CNOT1-216ENST00000569240 TRAV7A0A075B6U4 112 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 PFN2P35080 140 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 WFDC9Q8NEX5 89 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 ZNRF2Q8NHG8 242 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 ANK1P16157 1881 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 TRBV7-3A0A075B6L6 115 aa5.55□□□□□ -1.52
CNOT1-216ENST00000569240 RSPO4Q2I0M5 234 aaPredicted RBP5.55□□□□□ -1.52
CNOT1-216ENST00000569240 MAP1BP46821 2468 aaKnown RBP5.54□□□□□ -1.52
CNOT1-216ENST00000569240 TRAV4A0A0B4J268 109 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 NSUN5P1Q3KNT7 163 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 MDS2Q8NDY4 140 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 VPREB3Q9UKI3 123 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 H7C423 109 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 I3L2K1 104 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 Q8N976 141 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 TRBV10-1A0A0K0K1A3 114 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 CD24P25063 80 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 UBE2AP49459 152 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 SUMO4Q6EEV6 95 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 NPBQ8NG41 125 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 PYGO1Q9Y3Y4 419 aa5.54□□□□□ -1.52
CNOT1-216ENST00000569240 CACNA1IQ9P0X4 2223 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 A0A0J9YXV3 536 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TRBV10-3A0A0K0K1G6 114 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 FAM186AA6NE01 2351 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 LOC107984640A0A0U1RRK4 108 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 UBE2D3P61077 147 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 UBE2D2P62837 147 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 NKAPP1Q8N9T2 125 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 BRCA1P38398 1863 aaKnown RBP5.53□□□□□ -1.52
CNOT1-216ENST00000569240 CHD3Q12873 2000 aaKnown RBP5.53□□□□□ -1.52
CNOT1-216ENST00000569240 HEATR5AQ86XA9 2040 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TRAV26-2A0A0B4J265 109 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV7-4-1A0A0J9YVY3 117 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TIRAPP58753 221 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 COX7B2Q8TF08 81 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 HIGD2BQ4VC39 106 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 LINC00574Q9H8X3 128 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TP53BP1Q12888 1972 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-216ENST00000569240 MPDZO75970 2070 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TEX49A0A1B0GTD5 131 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 TEX22C9J3V5 150 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 IGKV1-17P01599 117 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 UBE2D1P51668 147 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 RMI2Q96E14 147 aa5.53□□□□□ -1.52
CNOT1-216ENST00000569240 FAM27E3Q08E93 113 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 ZNF672Q499Z4 452 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-216ENST00000569240 Q6ZR03 302 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 NFE4Q86UQ8 179 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 SBF1O95248 1867 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 ADAMTSL1Q8N6G6 1762 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 TRBV6-5A0A0K0K1A5 114 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 KLHL30-AS1Q8NEE0 82 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 ZNF524Q96C55 264 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 TMEM89A2RUT3 159 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 LINC00694P0DN24 101 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 LY6EQ16553 131 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 SP5Q6BEB4 398 aaPredicted RBP5.52□□□□□ -1.53
CNOT1-216ENST00000569240 UNC13CQ8NB66 2214 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 K7EMT4 169 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 MYCNOSP40205 109 aa5.52□□□□□ -1.53
CNOT1-216ENST00000569240 FAM19A5Q7Z5A7 132 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms