RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 PLXND1Q9Y4D7 1925 aa13.77□□□□□ -0.2
SYNE3-204ENST00000555759 H0YGX0 51 aa13.77□□□□□ -0.2
SYNE3-204ENST00000555759 RNF138Q8WVD3 245 aa13.77□□□□□ -0.2
SYNE3-204ENST00000555759 FGF23Q9GZV9 251 aaPredicted RBP13.77□□□□□ -0.2
SYNE3-204ENST00000555759 KAAG1Q9UBP8 84 aa13.77□□□□□ -0.2
SYNE3-204ENST00000555759 A0A1B0GX51 115 aa13.77□□□□□ -0.21
SYNE3-204ENST00000555759 E7EQL1 145 aa13.77□□□□□ -0.21
SYNE3-204ENST00000555759 A0A1B0GXF2 115 aa13.77□□□□□ -0.21
SYNE3-204ENST00000555759 C11orf53Q8IXP5 236 aa13.77□□□□□ -0.21
SYNE3-204ENST00000555759 RNF183Q96D59 192 aa13.76□□□□□ -0.21
SYNE3-204ENST00000555759 BRWD3Q6RI45 1802 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 C19orf71A6NCJ1 209 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 ZNRF2Q8NHG8 242 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 IGFBPL1Q8WX77 278 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 TOMM6Q96B49 74 aa13.75□□□□□ -0.21
SYNE3-204ENST00000555759 HEATR1Q9H583 2144 aaKnown RBP13.75□□□□□ -0.21
SYNE3-204ENST00000555759 DIAPH2-AS1Q14236 149 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 UBE2E2Q96LR5 201 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 AKAP6Q13023 2319 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 FER1L5A0AVI2 2057 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 BRD3OSQ6XYD6 125 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 Q6ZS92 163 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 Q9H8V8 135 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 B4DSR2 109 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 KLHL30-AS1Q8NEE0 82 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 TRIOBPQ9H2D6 2365 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 FOXE3Q13461 319 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
SYNE3-204ENST00000555759 G3V318 75 aa13.73□□□□□ -0.21
SYNE3-204ENST00000555759 SPANXB1Q9NS25 103 aaPredicted RBP13.73□□□□□ -0.21
SYNE3-204ENST00000555759 CDK2AP2O75956 126 aa13.73□□□□□ -0.21
SYNE3-204ENST00000555759 MRPL23Q16540 153 aaKnown RBP13.73□□□□□ -0.21
SYNE3-204ENST00000555759 INTS1Q8N201 2190 aaKnown RBP13.73□□□□□ -0.21
SYNE3-204ENST00000555759 SHANK1Q9Y566 2161 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 KMT2EQ8IZD2 1858 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 C11orf86A6NJI1 115 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 I3L2K1 104 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 NDUFV3P56181 108 aaKnown RBP13.72□□□□□ -0.21
SYNE3-204ENST00000555759 TIMM17AQ99595 171 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 MSRB1Q9NZV6 116 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 DIDO1Q9BTC0 2240 aaKnown RBP13.72□□□□□ -0.21
SYNE3-204ENST00000555759 HELZP42694 1942 aaKnown RBP13.72□□□□□ -0.21
SYNE3-204ENST00000555759 IGLV2-14P01704 120 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 MYO7BQ6PIF6 2116 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 MGAMO43451 1857 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 SLC25A29Q8N8R3 303 aa13.72□□□□□ -0.21
SYNE3-204ENST00000555759 IGHV7-4-1A0A0J9YVY3 117 aa13.71□□□□□ -0.21
SYNE3-204ENST00000555759 F6UB75 175 aa13.71□□□□□ -0.21
SYNE3-204ENST00000555759 BAALCQ8WXS3 180 aa13.71□□□□□ -0.21
SYNE3-204ENST00000555759 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
SYNE3-204ENST00000555759 C22orf46C9J442 243 aa13.71□□□□□ -0.21
SYNE3-204ENST00000555759 RS1O15537 224 aa13.71□□□□□ -0.22
SYNE3-204ENST00000555759 YLPM1P49750 1951 aaKnown RBP13.71□□□□□ -0.22
SYNE3-204ENST00000555759 LINC00643Q86TS7 51 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 RPL39LQ96EH5 51 aaKnown RBP13.7□□□□□ -0.22
SYNE3-204ENST00000555759 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
SYNE3-204ENST00000555759 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 IGKV1-17P01599 117 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 TM2D2Q9BX73 214 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 GNRH2O43555 120 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 NDUFA11Q86Y39 141 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 H3BUA1 57 aa13.7□□□□□ -0.22
SYNE3-204ENST00000555759 ODF3L1Q8IXM7 274 aa13.69□□□□□ -0.22
SYNE3-204ENST00000555759 TRAV12-2A0A075B6T6 113 aa13.69□□□□□ -0.22
SYNE3-204ENST00000555759 P0C879 139 aa13.68□□□□□ -0.22
SYNE3-204ENST00000555759 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
SYNE3-204ENST00000555759 MED14OSP0DP75 135 aa13.68□□□□□ -0.22
SYNE3-204ENST00000555759 TNRC6AQ8NDV7 1962 aaKnown RBP13.68□□□□□ -0.22
SYNE3-204ENST00000555759 IGLV2-8P01709 118 aa13.68□□□□□ -0.22
SYNE3-204ENST00000555759 NXPH4O95158 308 aa13.68□□□□□ -0.22
SYNE3-204ENST00000555759 IGKV1OR2-108A0A075B7D4 117 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 K7EIM0 57 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 LGALS9O00182 355 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 LHBP01229 141 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 MT-ATP8P03928 68 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 WNK2Q9Y3S1 2297 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 A0A0J9YXV3 536 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 IGHG2P01859 326 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 PSMB8P28062 276 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 PTH2Q96A98 100 aa13.67□□□□□ -0.22
SYNE3-204ENST00000555759 RPL35AP18077 110 aaKnown RBP13.67□□□□□ -0.22
SYNE3-204ENST00000555759 RNASE13Q5GAN3 156 aaKnown RBP13.67□□□□□ -0.22
SYNE3-204ENST00000555759 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 H3BQ85 93 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 XCL2Q9UBD3 114 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 TP53TG3Q9ULZ0 132 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 hADV29S1A0JD25 119 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 TCL1BO95988 128 aa13.66□□□□□ -0.22
SYNE3-204ENST00000555759 IGKV3D-7A0A0C4DH55 119 aa13.65□□□□□ -0.22
SYNE3-204ENST00000555759 IGHV1-69P01742 117 aa13.65□□□□□ -0.22
SYNE3-204ENST00000555759 WI2-2373I1.2A0A1W2PRP0 233 aa13.65□□□□□ -0.22
SYNE3-204ENST00000555759 UQCRQO14949 82 aa13.65□□□□□ -0.22
SYNE3-204ENST00000555759 NBL1P41271 181 aa13.65□□□□□ -0.22
SYNE3-204ENST00000555759 JMJD7-PLA2G4BH0Y9G9 81 aa13.64□□□□□ -0.23
SYNE3-204ENST00000555759 ZNF561-AS1K7EIQ3 104 aa13.64□□□□□ -0.23
SYNE3-204ENST00000555759 BPESC1Q9GZL8 116 aa13.64□□□□□ -0.23
SYNE3-204ENST00000555759 ZNF503Q96F45 646 aa13.64□□□□□ -0.23
SYNE3-204ENST00000555759 TRAV25A0A0B4J276 109 aa13.64□□□□□ -0.23
SYNE3-204ENST00000555759 MBD6Q96DN6 1003 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms