RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 AMBPP02760 352 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 PFN1P07737 140 aaKnown RBP10.65□□□□□ -0.7
SHMT2-208ENST00000553868 RPL19P84098 196 aaKnown RBP10.65□□□□□ -0.7
SHMT2-208ENST00000553868 CBLN2Q8IUK8 224 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 IL36BQ9NZH7 164 aa10.65□□□□□ -0.7
SHMT2-208ENST00000553868 TMEM189A5PLL7 270 aa10.64□□□□□ -0.71
SHMT2-208ENST00000553868 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
SHMT2-208ENST00000553868 FRMD6-AS1P0C7T7 363 aa10.64□□□□□ -0.71
SHMT2-208ENST00000553868 CDKN1BP46527 198 aa10.64□□□□□ -0.71
SHMT2-208ENST00000553868 CRIP1P50238 77 aa10.64□□□□□ -0.71
SHMT2-208ENST00000553868 LINC00322Q6ZN03 302 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-208ENST00000553868 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
SHMT2-208ENST00000553868 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
SHMT2-208ENST00000553868 KLLNB2CW77 178 aa10.63□□□□□ -0.71
SHMT2-208ENST00000553868 CD7P09564 240 aa10.63□□□□□ -0.71
SHMT2-208ENST00000553868 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
SHMT2-208ENST00000553868 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
SHMT2-208ENST00000553868 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
SHMT2-208ENST00000553868 C7orf71A4D174 169 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 J3KRW8 73 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 ORM1P02763 201 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 ZNF80P51504 273 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-208ENST00000553868 Q6AWC8 147 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 AMTNQ6UX39 209 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 GFRA4Q9GZZ7 299 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 URGCP-MRPS24S4R325 110 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 SORL1Q92673 2214 aa10.62□□□□□ -0.71
SHMT2-208ENST00000553868 SMIM27A0A1W2PRY6 76 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 ZNF124Q15973 351 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 SPINK13Q1W4C9 94 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 LINC01559Q495D7 138 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
SHMT2-208ENST00000553868 C19orf73Q9NVV2 129 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
SHMT2-208ENST00000553868 M0R2Z0 102 aa10.6□□□□□ -0.71
SHMT2-208ENST00000553868 CXCL1P09341 107 aa10.6□□□□□ -0.71
SHMT2-208ENST00000553868 PRR9Q5T870 116 aa10.6□□□□□ -0.71
SHMT2-208ENST00000553868 C20orf144Q9BQM9 153 aa10.6□□□□□ -0.71
SHMT2-208ENST00000553868 TRBV24-1A0A075B6N3 115 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 A0A1W2PPQ1 181 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 CA1P00915 261 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-208ENST00000553868 ELOBQ15370 118 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 GFI1BQ5VTD9 330 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-208ENST00000553868 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 NEU1Q99519 415 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 TM2D3Q9BRN9 247 aa10.59□□□□□ -0.71
SHMT2-208ENST00000553868 INSP01308 110 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 TCL1AP56279 114 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 FAM3BP58499 235 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-208ENST00000553868 FAM159AQ6UWV7 190 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-208ENST00000553868 YPEL4Q96NS1 127 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 C1QTNF4Q9BXJ3 329 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 NAGKQ9UJ70 344 aa10.58□□□□□ -0.72
SHMT2-208ENST00000553868 TMSB15BA0A087X1C1 80 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 TRAV12-3A0A0B4J271 114 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 HIGD1CA8MV81 97 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 LINC00476Q8WZB0 136 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 FAM210BQ96KR6 192 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 PYGO2Q9BRQ0 406 aa10.57□□□□□ -0.72
SHMT2-208ENST00000553868 TRAV12-2A0A075B6T6 113 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 IGKV3D-20A0A0C4DH25 116 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 COLCA2A8K830 154 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 ZNF324O75467 553 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-208ENST00000553868 LY6G6CO95867 125 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-208ENST00000553868 FXYD7P58549 80 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 KIR3DS1Q14943 382 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 COX19Q49B96 90 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 DEFB125Q8N687 156 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 FER1L6-AS1Q8NA97 138 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
SHMT2-208ENST00000553868 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 F2Z2F3 143 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 GZMBP10144 247 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 ASIPP42127 132 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 TDRG1Q3Y452 100 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 ATP5L2Q7Z4Y8 100 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 SRD5A3Q9H8P0 318 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
SHMT2-208ENST00000553868 IGHV1OR15-1A0A075B7D0 117 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 A0A1B0GW15 77 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 CRXO43186 299 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-208ENST00000553868 TYMSP04818 313 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 S100A8P05109 93 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 RPL35AP18077 110 aaKnown RBP10.54□□□□□ -0.72
SHMT2-208ENST00000553868 RAB5AP20339 215 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
SHMT2-208ENST00000553868 RIGQ13278 110 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 MUC21Q5SSG8 566 aa10.54□□□□□ -0.72
SHMT2-208ENST00000553868 RASL11AQ6T310 242 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms