RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TRIOBPQ9H2D6 2365 aa1.31□□□□□ -2.2
LSM6P2-201ENST00000552208 KIAA1549LQ6ZVL6 1849 aa1.31□□□□□ -2.2
LSM6P2-201ENST00000552208 ZFC3H1O60293 1989 aaKnown RBP1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 TNRC6AQ8NDV7 1962 aaKnown RBP1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 NUPR2A6NF83 97 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 ZNF670-ZNF695F2Z2N8 137 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 YPEL1O60688 119 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 PITX3O75364 302 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 RBP4P02753 201 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 SPATA45Q537H7 98 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 ATP11AUNQ6ZP68 121 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 C3orf62Q6ZUJ4 267 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 TSC22D3Q99576 134 aa1.3□□□□□ -2.2
LSM6P2-201ENST00000552208 FLG2Q5D862 2391 aaPredicted RBP1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 K7ERU9 68 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 OCIAD2Q56VL3 154 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 IDO2Q6ZQW0 420 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 SNX29P2Q8IUI4 249 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 VPS25Q9BRG1 176 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 ERCC6Q03468 1493 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 E9PCH4 1651 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 CTTNBP2Q8WZ74 1663 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 KIDINS220Q9ULH0 1771 aa1.29□□□□□ -2.2
LSM6P2-201ENST00000552208 PTPRFP10586 1907 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 EFCAB10A6NFE3 127 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 M0R129 80 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 RHOHQ15669 191 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 LYPD5Q6UWN5 251 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 SLC25A26Q70HW3 274 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 AMELYQ99218 206 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 SDF2Q99470 211 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 TAS2R8Q9NYW2 309 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 ADGRB1O14514 1584 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 TET1Q8NFU7 2136 aa1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 PRRC2BQ5JSZ5 2229 aaKnown RBP1.28□□□□□ -2.2
LSM6P2-201ENST00000552208 COL6A6A6NMZ7 2263 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 TMEM30CPA0ZSE6 113 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 IGKCP01834 107 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 GYPBP06028 91 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 RPL37AP61513 92 aaKnown RBP1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 COPZ1P61923 177 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 NOP16Q9Y3C1 178 aaKnown RBP1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 FANCMQ8IYD8 2048 aa1.27□□□□□ -2.21
LSM6P2-201ENST00000552208 LRP5O75197 1615 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 MYOM3Q5VTT5 1437 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 TRAV2A0A0B4J234 112 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 ARL14EPLP0DKL9 152 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 EFNA4P52798 201 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 DEFB132Q7Z7B7 95 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 ATOH7Q8N100 152 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 SAR1AQ9NR31 198 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 MYO18AQ92614 2054 aaKnown RBP1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 OTOGLQ3ZCN5 2332 aa1.26□□□□□ -2.21
LSM6P2-201ENST00000552208 GRIN2AQ12879 1464 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 CXorf51AA0A1B0GTR3 108 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 J3QLW9 94 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 TPST1O60507 370 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 IL7P13232 177 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 FXYD4P59646 89 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 PPDPFLQ8WWR9 84 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 DMAC1Q96GE9 116 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 LINC00470Q9BZP3 86 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 MRPL36Q9P0J6 103 aaKnown RBP1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 BOKQ9UMX3 212 aaPredicted RBP1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 PEAK1Q9H792 1746 aa1.25□□□□□ -2.21
LSM6P2-201ENST00000552208 TMEM2Q9UHN6 1383 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 A0A0G2JMM0 328 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 NCR3O14931 201 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 SELENOWP63302 87 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 MIC13Q5XKP0 118 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 Q6ZUT4 128 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 DYNLRB2Q8TF09 96 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 TMEM191AQ9H0A3 160 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 MYH1P12882 1939 aa1.24□□□□□ -2.21
LSM6P2-201ENST00000552208 ANK1P16157 1881 aa1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 CDK5RAP2Q96SN8 1893 aa1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 KMT2BQ9UMN6 2715 aaPredicted RBP1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 NBDYA0A0U1RRE5 68 aa1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 POLR2JP52435 117 aaKnown RBP1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 C1orf54Q8WWF1 131 aa1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 MRPL35Q9NZE8 188 aaKnown RBP1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 PTPRMP28827 1452 aa1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 HELZP42694 1942 aaKnown RBP1.23□□□□□ -2.21
LSM6P2-201ENST00000552208 CASP8AP2Q9UKL3 1982 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 TRAV17A0A0B4J275 112 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 TRBV10-1A0A0K0K1A3 114 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 PYYP10082 97 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 RRAS2P62070 204 aaPredicted RBP1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 EMX2Q04743 252 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 LINC01545Q5VT33 79 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 SCIMPQ6UWF3 145 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 VSTM2AQ8TAG5 236 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 ARL11Q969Q4 196 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 ATG5Q9H1Y0 275 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 NCOA3Q9Y6Q9 1424 aa1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 NCOA6Q14686 2063 aaPredicted RBP1.22□□□□□ -2.21
LSM6P2-201ENST00000552208 GNG7O60262 68 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms