RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 DLX4Q92988 240 aaPredicted RBP6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 NOTCH2Q04721 2471 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 SPEGQ15772 3267 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 A0A087WWL8 130 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 IGHV7-81A0A0B4J1V7 117 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 TRBV6-1A0A0K0K1D8 114 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 WI2-2373I1.2A0A1W2PRP0 233 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 PSMB11A5LHX3 300 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 SPATA12Q7Z6I5 190 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 DAZ1Q9NQZ3 744 aaKnown RBP6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 BUB3O43684 328 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 C19orf54Q5BKX5 351 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 ERG28Q9UKR5 140 aa6.41□□□□□ -1.38
PRKAB1-207ENST00000542698 TRAV8-2A0A0B4J237 113 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 MYCNOSP40205 109 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 ANXA2RQ3ZCQ2 193 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 LCNL1Q6ZST4 164 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 CFHR4Q92496 578 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 NCOR2Q9Y618 2525 aa6.4□□□□□ -1.38
PRKAB1-207ENST00000542698 TRBV25-1A0A075B6N4 114 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 CEND1Q8N111 149 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 LINC01587Q99440 93 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 A0A087WX48 190 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 RBAKDNA6NC62 111 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 SLC25A16P16260 332 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 RUSC1-AS1Q66K80 236 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 BOD1L2Q8IYS8 172 aa6.4□□□□□ -1.39
PRKAB1-207ENST00000542698 MYMXA0A1B0GTQ4 84 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 TMEM262E9PQX1 116 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 CRXO43186 299 aaPredicted RBP6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 CD28P10747 220 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 HLA-DRB4P13762 266 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 FOXE3Q13461 319 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 ITLN2Q8WWU7 325 aaPredicted RBP6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 COPS9Q8WXC6 57 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 PRADC1Q9BSG0 188 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 HLA-DRB4X5D2U9 266 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 TRGV11A0A075B6L2 103 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 F8W1H4 67 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 K7ERJ3 54 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 NDUFS8O00217 210 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 LOXL1Q08397 574 aaPredicted RBP6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 TAL2Q16559 108 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 ZNF493Q6ZR52 646 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 TP53TG1Q9Y2A0 90 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 MSRB2Q9Y3D2 182 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 H3BMG7 143 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 NDUFA4O00483 81 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 UBE2L6O14933 153 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 COX6B1P14854 86 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 TCF15Q12870 199 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 C20orf78Q9BR46 151 aa6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 ANKRD11Q6UB99 2663 aaPredicted RBP6.39□□□□□ -1.39
PRKAB1-207ENST00000542698 RRN3P1Q2M238 152 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 Q8N9W7 124 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 LENEPQ9Y5L5 61 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 PRAC2D3DTV9 90 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 AMTNQ6UX39 209 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 TP73-AS1Q9UF72 201 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 CENPVL3A0A0U1RRI6 287 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 VWC2LB2RUY7 222 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 B4DSR2 109 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 PMVKQ15126 192 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 C12orf74Q32Q52 190 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 PLEKHB2Q96CS7 222 aa6.38□□□□□ -1.39
PRKAB1-207ENST00000542698 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 SAP30O75446 220 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 IGHV4-39P01824 125 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 MRPL53Q96EL3 112 aaKnown RBP6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 SPRY2O43597 315 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 CRYGBP07316 175 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 NEGR1Q7Z3B1 354 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 IGHV3-73A0A0B4J1V6 119 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 IGKV3D-20A0A0C4DH25 116 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 PRSS29PA6NIE9 313 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 PIP4P2Q8N4L2 257 aa6.37□□□□□ -1.39
PRKAB1-207ENST00000542698 IGKV3OR2-268A0A0C4DH90 116 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 Q8NA96 180 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 ZNF48Q96MX3 618 aaPredicted RBP6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 TSSC4Q9Y5U2 329 aaPredicted RBP6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 USP9YO00507 2555 aaPredicted RBP6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 F6UB75 175 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 CRIP1P50238 77 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 FXYD2P54710 66 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 TEX29Q8N6K0 151 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 Q8N976 141 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 GNRH2O43555 120 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 GNLYP22749 145 aa6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 ZNF80P51504 273 aaPredicted RBP6.36□□□□□ -1.39
PRKAB1-207ENST00000542698 SPXQ9BT56 116 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms