RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 ODF1Q14990 250 aa5.68□□□□□ -1.5
C11orf54-207ENST00000528288 COX8CQ7Z4L0 72 aa5.68□□□□□ -1.5
C11orf54-207ENST00000528288 C14orf178Q8N769 122 aaPredicted RBP5.68□□□□□ -1.5
C11orf54-207ENST00000528288 RPL39LQ96EH5 51 aaKnown RBP5.68□□□□□ -1.5
C11orf54-207ENST00000528288 SLC50A1Q9BRV3 221 aa5.68□□□□□ -1.5
C11orf54-207ENST00000528288 MRPL35Q9NZE8 188 aaKnown RBP5.68□□□□□ -1.5
C11orf54-207ENST00000528288 SAP30O75446 220 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 IGKV3-20P01619 116 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 S100A7P31151 101 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 ZC2HC1BQ5TFG8 222 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 MAPK1IP1LQ8NDC0 245 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 CST9LQ9H4G1 147 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 AGRNO00468 2067 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 TLN2Q9Y4G6 2542 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
C11orf54-207ENST00000528288 C10orf99Q6UWK7 81 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 GPHB5Q86YW7 130 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 TRBV7-1A0A0A6YYK4 115 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 GAGE12BA1L429 117 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 GAGE10A6NGK3 116 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 FXYD2P54710 66 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 ADAMTSL5Q6ZMM2 481 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 SPOCK3Q9BQ16 436 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 HHLA3Q9XRX5 114 aa5.67□□□□□ -1.5
C11orf54-207ENST00000528288 NRACQ8N912 160 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 MOB4Q9Y3A3 225 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 IGHV1-69DA0A0B4J2H0 117 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 IGHV1-69P01742 117 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 IGKCP01834 107 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 SMIM15Q7Z3B0 74 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 MAPKAPK5-AS1Q8N8E1 139 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 VPS25Q9BRG1 176 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 JPT2Q9H910 190 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 PEF1Q9UBV8 284 aaKnown RBP5.66□□□□□ -1.5
C11orf54-207ENST00000528288 IGHV4-30-2A0A087WSY4 118 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 Q8N8P6 123 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
C11orf54-207ENST00000528288 ABCA12Q86UK0 2595 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 IGLV2-18A0A075B6J9 118 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 A0A0G2JLM5 398 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 PPBPP02775 128 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 EMP1P54849 157 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 HIST2H2BDQ6DRA6 164 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 OR4X2Q8NGF9 303 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 NXT2Q9NPJ8 142 aaKnown RBP5.65□□□□□ -1.5
C11orf54-207ENST00000528288 NOTCH3Q9UM47 2321 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 IGSF10Q6WRI0 2623 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 AVPP01185 164 aa5.65□□□□□ -1.5
C11orf54-207ENST00000528288 RBAKDNA6NC62 111 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 RAB9AP51151 201 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 HSD52Q0P140 79 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 LAGE3Q14657 143 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 OCIAD2Q56VL3 154 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 C9orf47Q6ZRZ4 202 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 ZFAND2AQ8N6M9 145 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 OR1N2Q8NGR9 330 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 LRRK2Q5S007 2527 aa5.65□□□□□ -1.51
C11orf54-207ENST00000528288 OR10J6PQ8NGY7 276 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 MYOZ3Q8TDC0 251 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 PHLDA3Q9Y5J5 127 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 U3KQE9 123 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 ATP5J2P56134 94 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 SEC11AP67812 179 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 RHPN1-AS1Q9BWJ2 59 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 NHP2Q9NX24 153 aaKnown RBP5.64□□□□□ -1.51
C11orf54-207ENST00000528288 A6NDN8 102 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 C9orf118A6NHY6 69 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 DPM2O94777 84 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 RIPPLY3P57055 190 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 DPF1Q92782 380 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 DUX5Q96PT3 197 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 CCL19Q99731 98 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 SETD2Q9BYW2 2564 aaPredicted RBP5.64□□□□□ -1.51
C11orf54-207ENST00000528288 MUC4Q99102 2169 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 TRBV25-1A0A075B6N4 114 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 A0A087WWL8 130 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 MTURNQ8N3F0 131 aa5.64□□□□□ -1.51
C11orf54-207ENST00000528288 PTPN13Q12923 2485 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 MYO9AB2RTY4 2548 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 RASL10AQ92737 203 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 NPFFR1Q9GZQ6 430 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 SONP18583 2426 aaKnown RBP5.63□□□□□ -1.51
C11orf54-207ENST00000528288 TRAV12-2A0A075B6T6 113 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 H3BRM9 83 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 ARL6IP6Q8N6S5 226 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 OR9G4Q8NGQ1 327 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 PPP1R14DQ9NXH3 145 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 SRSF2Q01130 221 aaKnown RBP5.63□□□□□ -1.51
C11orf54-207ENST00000528288 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 SCGB3A1Q96QR1 104 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 SPCS1Q9Y6A9 102 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 DOPEY1Q5JWR5 2465 aa5.63□□□□□ -1.51
C11orf54-207ENST00000528288 TRAV12-3A0A0B4J271 114 aa5.62□□□□□ -1.51
C11orf54-207ENST00000528288 SRSF1Q07955 248 aaKnown RBP eCLIP5.62□□□□□ -1.51
C11orf54-207ENST00000528288 C19orf54Q5BKX5 351 aa5.62□□□□□ -1.51
C11orf54-207ENST00000528288 C9orf139Q6ZV77 190 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms