RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 IGKV3-11P04433 115 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 CTSGP08311 255 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 ADCYAP1P18509 176 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 MIR22HGQ0VDD5 57 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 Q6ZTI0 123 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 CLECL1Q8IZS7 167 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 DYNLRB2Q8TF09 96 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 CCL26Q9Y258 94 aa2.28□□□□□ -2.05
SKP1-209ENST00000522552 CASZ1Q86V15 1759 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 SPHKAPQ2M3C7 1700 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 PLXNA2O75051 1894 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 ROBO1Q9Y6N7 1651 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 TRAV14DV4A0A0A6YYC5 116 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 RTL8CO15255 209 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 INSL4Q14641 139 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 Q8N8P6 123 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 TSKUQ8WUA8 353 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 PRO1933Q9H354 126 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 PLXNA4Q9HCM2 1894 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 SLIT2O94813 1529 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 MED12LQ86YW9 2145 aa2.27□□□□□ -2.05
SKP1-209ENST00000522552 CCDC18Q5T9S5 1454 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 C2orf70A6NJV1 201 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 MT-ATP8P03928 68 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 CXCL8P10145 99 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 PIPP12273 146 aaPredicted RBP2.26□□□□□ -2.05
SKP1-209ENST00000522552 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 VAMP8Q9BV40 100 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 DPH3P1Q9H4G8 78 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 NDUFA12Q9UI09 145 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 LINC00312Q9Y6C7 94 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 RBBP6Q7Z6E9 1792 aaKnown RBP2.26□□□□□ -2.05
SKP1-209ENST00000522552 TEX14Q8IWB6 1497 aa2.26□□□□□ -2.05
SKP1-209ENST00000522552 BAZ1AQ9NRL2 1556 aaPredicted RBP2.26□□□□□ -2.05
SKP1-209ENST00000522552 RBAKDNA6NC62 111 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 RPL26P61254 145 aaKnown RBP2.25□□□□□ -2.05
SKP1-209ENST00000522552 S100A7L2Q5SY68 101 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 SPANXN1Q5VSR9 72 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 C12orf73Q69YU5 71 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 TMEM106BQ9NUM4 274 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 DOCK1Q14185 1865 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 KDM5AP29375 1690 aaKnown RBP2.25□□□□□ -2.05
SKP1-209ENST00000522552 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 CC2D2AQ9P2K1 1620 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 LRCOL1A6NCL2 159 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 LINC00032P0C843 101 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 PRB4P10163 310 aaPredicted RBP2.25□□□□□ -2.05
SKP1-209ENST00000522552 KRTAP26-1Q6PEX3 210 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 C2orf82Q6UX34 121 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 ZNF833PQ6ZTB9 187 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 SBSPONQ8IVN8 264 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 CMTM2Q8TAZ6 248 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 AP4S1Q9Y587 144 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 MPDZO75970 2070 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 MYOFQ9NZM1 2061 aa2.25□□□□□ -2.05
SKP1-209ENST00000522552 ARHGAP35Q9NRY4 1499 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 ANK1P16157 1881 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 ADGRB3O60242 1522 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 ARHGAP5Q13017 1502 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 KIAA1549LQ6ZVL6 1849 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 CHD3Q12873 2000 aaKnown RBP2.24□□□□□ -2.05
SKP1-209ENST00000522552 IGLC1P0CG04 106 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 SNCAP37840 140 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 RBM3P98179 157 aaKnown RBP2.24□□□□□ -2.05
SKP1-209ENST00000522552 PDE6HQ13956 83 aa2.24□□□□□ -2.05
SKP1-209ENST00000522552 TNRC6AQ8NDV7 1962 aaKnown RBP2.24□□□□□ -2.05
SKP1-209ENST00000522552 A0A0G2JQZ4 141 aa2.23□□□□□ -2.05
SKP1-209ENST00000522552 COX7CP15954 63 aa2.23□□□□□ -2.05
SKP1-209ENST00000522552 DCDP81605 110 aaKnown RBP2.23□□□□□ -2.05
SKP1-209ENST00000522552 C5orf38Q86SI9 138 aa2.23□□□□□ -2.05
SKP1-209ENST00000522552 TMEM141Q96I45 108 aa2.23□□□□□ -2.05
SKP1-209ENST00000522552 TIMM21Q9BVV7 248 aa2.23□□□□□ -2.05
SKP1-209ENST00000522552 UNC13CQ8NB66 2214 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 IGKV2-28A0A075B6P5 120 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 TRAV2A0A0B4J234 112 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 TRAV17A0A0B4J275 112 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 UBE2L5PA0A1B0GUS4 154 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 IGKV2D-28P01615 120 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 UBE2L3P68036 154 aaKnown RBP2.22□□□□□ -2.05
SKP1-209ENST00000522552 SPRNQ5BIV9 151 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 LCN9Q8WX39 176 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 ABCA3Q99758 1704 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 LRP5O75197 1615 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 BRWD1Q9NSI6 2320 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 RTTNQ86VV8 2226 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 LAMB2P55268 1798 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 PTPRFP10586 1907 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 MAGI1Q96QZ7 1491 aaPredicted RBP2.22□□□□□ -2.05
SKP1-209ENST00000522552 KIAA0100Q14667 2235 aaKnown RBP2.22□□□□□ -2.05
SKP1-209ENST00000522552 UQCRHLA0A096LP55 91 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 H3BQF6 201 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 SSSCA1O60232 199 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 UQCRHP07919 91 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 UBE2G1P62253 170 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
SKP1-209ENST00000522552 TPRXLQ17RH7 258 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 KRTAP13-2Q52LG2 175 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 ATG5Q9H1Y0 275 aa2.22□□□□□ -2.05
SKP1-209ENST00000522552 FYCO1Q9BQS8 1478 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms