RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 HERC1Q15751 4861 aa1.68□□□□□ -2.14
SQLE-204ENST00000520493 LAMB4A4D0S4 1761 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 CDK5RAP2Q96SN8 1893 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 CLASP1Q7Z460 1538 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 TRBV6-8A0A0A6YYG3 113 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 C5orf67F2Z3F1 127 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 NCR2O95944 276 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 SLC25A4P12235 298 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 BLCAPP62952 87 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 TMEM91Q6ZNR0 172 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 OR10AG1Q8NH19 301 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 Q8TAT8 98 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 ZNF625Q96I27 306 aaPredicted RBP1.67□□□□□ -2.14
SQLE-204ENST00000520493 NABP2Q9BQ15 211 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 REG4Q9BYZ8 158 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 SMIM3Q9BZL3 60 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 CYSTM1Q9H1C7 97 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 BANF2Q9H503 90 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 FREM3P0C091 2139 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 USP54Q70EL1 1684 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 MGAMO43451 1857 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 KIAA1549Q9HCM3 1950 aa1.67□□□□□ -2.14
SQLE-204ENST00000520493 PRG4Q92954 1404 aaPredicted RBP1.66□□□□□ -2.14
SQLE-204ENST00000520493 TLN2Q9Y4G6 2542 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 PNMA8CA0A1B0GUJ8 204 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 CCDC160A6NGH7 325 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 J3QR89 54 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 CCL16O15467 120 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 HLA-DRB4P13762 266 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 HIST1H1BP16401 226 aaKnown RBP1.66□□□□□ -2.14
SQLE-204ENST00000520493 ETV6P41212 452 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 AKR1D1P51857 326 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 DIAPH2-AS1Q14236 149 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 TEX261Q6UWH6 196 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 LINC00052Q96N35 136 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 NAA38Q9BRA0 125 aaKnown RBP1.66□□□□□ -2.14
SQLE-204ENST00000520493 ORMDL1Q9P0S3 153 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 KLK9Q9UKQ9 250 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 HLA-DRB4X5D2U9 266 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 SMARCA2P51531 1590 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 PEG3Q9GZU2 1588 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 CDH23Q9H251 3354 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 PCNX2A6NKB5 2137 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 CR1P17927 2039 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 MYH1P12882 1939 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 ALKQ9UM73 1620 aa1.66□□□□□ -2.14
SQLE-204ENST00000520493 FSIP2Q5CZC0 6907 aa1.65□□□□□ -2.14
SQLE-204ENST00000520493 NEBP20929 6669 aa1.65□□□□□ -2.14
SQLE-204ENST00000520493 CELSR1Q9NYQ6 3014 aa1.65□□□□□ -2.14
SQLE-204ENST00000520493 MTORP42345 2549 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 C9orf170A2RU37 121 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 K7EP13 123 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 CD2P06729 351 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 CCSMST1Q4G0I0 132 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 FAM74A1Q5RGS3 127 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 TEN1Q86WV5 123 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 TSTD1Q8NFU3 115 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 OR10AC1Q8NH08 325 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 ZNF563Q8TA94 476 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 FKBP11Q9NYL4 201 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 METTL1Q9UBP6 276 aaKnown RBP1.65□□□□□ -2.15
SQLE-204ENST00000520493 MPC1Q9Y5U8 109 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 WDR97A6NE52 1622 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 ARHGAP31Q2M1Z3 1444 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
SQLE-204ENST00000520493 CCDC171Q6TFL3 1326 aa1.65□□□□□ -2.15
SQLE-204ENST00000520493 SMG1Q96Q15 3661 aaKnown RBP1.64□□□□□ -2.15
SQLE-204ENST00000520493 ADGRB2O60241 1585 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 CELSR2Q9HCU4 2923 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
SQLE-204ENST00000520493 GOLGA3Q08378 1498 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 GAPVD1Q14C86 1478 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 SPTA1P02549 2419 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 M0R2N4 97 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 SULT1C4O75897 302 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 IGLC6P0CF74 106 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 COX7CP15954 63 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 NCS1P62166 190 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 UNQ6190/PRO20217Q6UXQ8 127 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 FOXI2Q6ZQN5 318 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 FAM19A2Q8N3H0 131 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 C1orf54Q8WWF1 131 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 CIB3Q96Q77 187 aaPredicted RBP1.64□□□□□ -2.15
SQLE-204ENST00000520493 FRYQ5TBA9 3013 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 CEP162Q5TB80 1403 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 ITPR1Q14643 2758 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 ABCC8Q09428 1581 aa1.64□□□□□ -2.15
SQLE-204ENST00000520493 XIRP2A4UGR9 3374 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 WDR87Q6ZQQ6 2873 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 SYNE2Q8WXH0 6885 aaKnown RBP1.63□□□□□ -2.15
SQLE-204ENST00000520493 TRBV6-4A0A1B0GX49 114 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 IFITM5A6NNB3 132 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 J3QKU1 62 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 YPEL1O60688 119 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 SNRPD3P62318 126 aaKnown RBP1.63□□□□□ -2.15
SQLE-204ENST00000520493 MIR22HGQ0VDD5 57 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 CASC2Q6XLA1 102 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 GKN2Q86XP6 184 aa1.63□□□□□ -2.15
SQLE-204ENST00000520493 CTAGE3PQ8IX95 158 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms