RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 TCRAP04437 139 aa8.47□□□□□ -1.05
VEGFA-218ENST00000518689 TYMSP04818 313 aa8.47□□□□□ -1.05
VEGFA-218ENST00000518689 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
VEGFA-218ENST00000518689 RPL7L1Q6DKI1 246 aaKnown RBP8.47□□□□□ -1.05
VEGFA-218ENST00000518689 C5orf17Q8NAS9 161 aa8.47□□□□□ -1.05
VEGFA-218ENST00000518689 C11orf21Q9P2W6 132 aa8.47□□□□□ -1.05
VEGFA-218ENST00000518689 HSPG2P98160 4391 aa8.46□□□□□ -1.05
VEGFA-218ENST00000518689 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 M0R2P5 195 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 SIVA1O15304 175 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 NXPH4O95158 308 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 CXorf1O96002 111 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
VEGFA-218ENST00000518689 ZNF726P1Q15940 193 aa8.46□□□□□ -1.06
VEGFA-218ENST00000518689 MRPL23Q16540 153 aaKnown RBP8.46□□□□□ -1.06
VEGFA-218ENST00000518689 Q6ZRN7 208 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-218ENST00000518689 INO80EQ8NBZ0 244 aaPredicted RBP8.46□□□□□ -1.06
VEGFA-218ENST00000518689 FXYD6-FXYD2A0A087WZ82 144 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 TRAV4A0A0B4J268 109 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 K7EQD1 137 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 BTF3P20290 206 aaKnown RBP8.45□□□□□ -1.06
VEGFA-218ENST00000518689 LINC00315P59091 139 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 NEGR1Q7Z3B1 354 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 OR2T35Q8NGX2 323 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 KCNS1Q96KK3 526 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 ACTR3CQ9C0K3 210 aaPredicted RBP8.45□□□□□ -1.06
VEGFA-218ENST00000518689 TMEM167BQ9NRX6 74 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 EPDR1Q9UM22 224 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 PSG8Q9UQ74 426 aa8.45□□□□□ -1.06
VEGFA-218ENST00000518689 GYPEP15421 78 aa8.44□□□□□ -1.06
VEGFA-218ENST00000518689 FLI1Q01543 452 aaPredicted RBP8.44□□□□□ -1.06
VEGFA-218ENST00000518689 SDF2L1Q9HCN8 221 aa8.44□□□□□ -1.06
VEGFA-218ENST00000518689 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
VEGFA-218ENST00000518689 BORCS7-ASMTA0A0B4J1R7 106 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 A0A1W2PRE2 83 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 K7EQM0 130 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 GCGP01275 180 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 CYB561D1Q8N8Q1 229 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 OR4C5Q8NGB2 326 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 LINC00479Q96M42 142 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 NDFIP1Q9BT67 221 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 KRTAP4-5Q9BYR2 181 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 CYTL1Q9NRR1 136 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 TNFRSF18Q9Y5U5 241 aa8.43□□□□□ -1.06
VEGFA-218ENST00000518689 CTXND1A0A1B0GTU2 59 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 TAAR5O14804 337 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 ORM1P02763 201 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 PFN1P07737 140 aaKnown RBP8.42□□□□□ -1.06
VEGFA-218ENST00000518689 SRIP30626 198 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 RGS21Q2M5E4 152 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 DPPA3Q6W0C5 159 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 SPATA12Q7Z6I5 190 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 PRNTQ86SH4 94 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 TMEM75Q8N9X5 138 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 C9orf85Q96MD7 179 aa8.42□□□□□ -1.06
VEGFA-218ENST00000518689 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 C9JCJ5 164 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 CDK2AP2O75956 126 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 GATA1P15976 413 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-218ENST00000518689 SMUG1Q53HV7 270 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 WFDC10BQ8IUB3 73 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 KRTAP3-2Q9BYR7 98 aa8.41□□□□□ -1.06
VEGFA-218ENST00000518689 PGPEP1LA6NFU8 196 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 FBLL1A6NHQ2 334 aaKnown RBP8.4□□□□□ -1.06
VEGFA-218ENST00000518689 RS1O15537 224 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 RNASE3P12724 160 aaKnown RBP8.4□□□□□ -1.06
VEGFA-218ENST00000518689 FGF8P55075 233 aaPredicted RBP8.4□□□□□ -1.06
VEGFA-218ENST00000518689 UBE2G2P60604 165 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 ZNF876PQ49A33 203 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 SAPCD1Q5SSQ6 148 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 CFAP126Q5VTH2 177 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 PCNPQ8WW12 178 aaKnown RBP8.4□□□□□ -1.06
VEGFA-218ENST00000518689 PTH2Q96A98 100 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 TXNDC17Q9BRA2 123 aa8.4□□□□□ -1.06
VEGFA-218ENST00000518689 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.07
VEGFA-218ENST00000518689 IGKV3D-20A0A0C4DH25 116 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 FAM74A7A6NL05 159 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 SMLR1H3BR10 107 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 ARPC5O15511 151 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 LY96Q9Y6Y9 160 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 DNAH5Q8TE73 4624 aa8.39□□□□□ -1.07
VEGFA-218ENST00000518689 PEX7O00628 323 aa8.38□□□□□ -1.07
VEGFA-218ENST00000518689 IFNA7P01567 189 aa8.38□□□□□ -1.07
VEGFA-218ENST00000518689 ZFP69Q49AA0 526 aa8.38□□□□□ -1.07
VEGFA-218ENST00000518689 ZNF506Q5JVG8 444 aa8.38□□□□□ -1.07
VEGFA-218ENST00000518689 AKR1C8PQ5T2L2 129 aa8.38□□□□□ -1.07
VEGFA-218ENST00000518689 TRAV9-2A0A087WT02 112 aa8.37□□□□□ -1.07
VEGFA-218ENST00000518689 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
VEGFA-218ENST00000518689 TRBV6-4A0A1B0GX49 114 aa8.37□□□□□ -1.07
VEGFA-218ENST00000518689 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
VEGFA-218ENST00000518689 FABP5P3A8MUU1 101 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms