RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 NPCDR1Q9BY65 106 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 C20orf27Q9GZN8 174 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 GEMIN7Q9H840 131 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CDC42SE2Q9NRR3 84 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TMEM94Q12767 1356 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FGD6Q6ZV73 1430 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FYCO1Q9BQS8 1478 aa-2.27□□□□□ -2.77
RNU6-1238P-201ENST00000517215 UBR2Q8IWV8 1755 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CXorf51AA0A1B0GTR3 108 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SPAARA0A1B0GVQ0 90 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 A8MT66 165 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CDC42EP2O14613 210 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CST7O76096 145 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 ORM1P02763 201 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 SAA1P0DJI8 122 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 GAP43P17677 238 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 CMPK1P30085 196 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TMEM53Q6P2H8 277 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 ATP11AUNQ6ZP68 121 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 FAM228AQ86W67 206 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 Q8N8P6 123 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 PIGXQ8TBF5 258 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 STAG3L4Q8TBR4 150 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TEX37Q96LM6 180 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 GPX7Q96SL4 187 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 VPS25Q9BRG1 176 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TMBIM4Q9HC24 238 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 TAS2R3Q9NYW6 316 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 DKKL1Q9UK85 242 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 NEO1Q92859 1461 aa-2.28□□□□□ -2.77
RNU6-1238P-201ENST00000517215 LRRC37A2A6NM11 1700 aa-2.28□□□□□ -2.78
RNU6-1238P-201ENST00000517215 WDFY3Q8IZQ1 3526 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRAV5A0A0B4J249 113 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 A0A1B0GTQ1 180 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 J3QRK9 145 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SPAG6O75602 509 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LDOC1O95751 146 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CST4P01036 141 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 OR5G3P0C626 314 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SMIM6P0DI80 62 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SMIM10L2AP0DMW4 78 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SMIM10L2BP0DMW5 78 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 KDELR2P33947 212 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TMED1Q13445 227 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 COQ5Q5HYK3 327 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SPANXN2Q5MJ10 180 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LELP1Q5T871 98 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SMIM4Q8WVI0 70 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ATP6V1E2Q96A05 226 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DIRAS2Q96HU8 199 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 C2orf50Q96LR7 162 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PKIBQ9C010 78 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RSPH9Q9H1X1 276 aaPredicted RBP-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CACYBPQ9HB71 228 aaKnown RBP-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RMND1Q9NWS8 449 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CDKN2A-AS1Q9UH64 79 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NDUFA12Q9UI09 145 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 BLOC1S6Q9UL45 172 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ASB4Q9Y574 426 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TMEM56-RWDD3S4R434 201 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PATJQ8NI35 1801 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PHIPQ8WWQ0 1821 aa-2.29□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CEP350Q5VT06 3117 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DOCK5Q9H7D0 1870 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 SETBP1Q9Y6X0 1596 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRAV26-2A0A0B4J265 109 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LINC00959A0A1B0GUT2 108 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DAPL1A0PJW8 107 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TMEM210A6NLX4 147 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 WBP4O75554 376 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IFNA21P01568 189 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LIMS3P0CW19 117 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LIMS4P0CW20 117 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ERP29P30040 261 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 S100A5P33763 92 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CLDN8P56748 225 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CXCR4P61073 352 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 PRLHP81277 87 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LRRC23Q53EV4 343 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 C6orf183Q5T699 404 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 EIF3MQ7L2H7 374 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 AKAP14Q86UN6 197 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 OR5AK2Q8NH90 309 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 FAM81AQ8TBF8 368 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 CCDC12Q8WUD4 166 aaPredicted RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 EEF1AKMT1Q8WVE0 214 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 DIRC1Q969H9 104 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LINC01600Q96MT4 127 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 MRPL34Q9BQ48 92 aaKnown RBP-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 NDUFA4L2Q9NRX3 87 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 GCNT4Q9P109 453 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 LAMTOR3Q9UHA4 124 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TPRKBQ9Y3C4 175 aa-2.3□□□□□ -2.78
RNU6-1238P-201ENST00000517215 TRPM1Q7Z4N2 1603 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 A0A1B0GV50 99 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 RER1O15258 196 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ARPC5O15511 151 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 STX10O60499 249 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 ATP5HO75947 161 aa-2.31□□□□□ -2.78
RNU6-1238P-201ENST00000517215 IFNA5P01569 189 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms