RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 VIRMAQ69YN4 1812 aaKnown RBP0.33□□□□□ -2.36
CD46-218ENST00000496723 MED23Q9ULK4 1368 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 A0A0G2JMM0 328 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 TSTD3H0UI37 97 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 FXYD1O00168 92 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 CDC42EP2O14613 210 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 UQCRQO14949 82 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 PSPHP78330 225 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 ASB16-AS1Q495Z4 193 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 DEFB132Q7Z7B7 95 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 C5orf56Q8N8D9 126 aa0.32□□□□□ -2.36
CD46-218ENST00000496723 LRP5O75197 1615 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 OVOS2A0A0G2JMS6 1433 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 IGHV1-24A0A0C4DH33 117 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 NBDYA0A0U1RRE5 68 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 LOC101927531A0A1B0GV80 90 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 IL7P13232 177 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 PCBD1P61457 104 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 RPL37P61927 97 aaKnown RBP0.31□□□□□ -2.36
CD46-218ENST00000496723 RHOHQ15669 191 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 UNQ5815/PRO19632Q6UWF5 114 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 LYPD5Q6UWN5 251 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 OTOSQ8NHW6 89 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 LINC00208Q96KT6 92 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 COMMD3Q9UBI1 195 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 TANC1Q9C0D5 1861 aa0.31□□□□□ -2.36
CD46-218ENST00000496723 MYH13Q9UKX3 1938 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 PTPRZ1P23471 2315 aaPredicted RBP0.3□□□□□ -2.36
CD46-218ENST00000496723 J3KT08 172 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 DPM2O94777 84 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 HIST1H1BP16401 226 aaKnown RBP0.3□□□□□ -2.36
CD46-218ENST00000496723 SDC4P31431 198 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 ZNF56Q15929 161 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 OR8I2Q8N0Y5 310 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 OR4S1Q8NGB4 309 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 ATG5Q9H1Y0 275 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 HSPB11Q9Y547 144 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 MED13LQ71F56 2210 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 PTPRGP23470 1445 aa0.3□□□□□ -2.36
CD46-218ENST00000496723 ZCCHC6Q5VYS8 1495 aaKnown RBP0.29□□□□□ -2.36
CD46-218ENST00000496723 IGKCP01834 107 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 ADCYAP1P18509 176 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 POLR2JP52435 117 aaKnown RBP0.29□□□□□ -2.36
CD46-218ENST00000496723 KLKP1Q107X0 134 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 IQCJQ1A5X6 159 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 HSD17B12Q53GQ0 312 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 METTL1Q9UBP6 276 aaKnown RBP0.29□□□□□ -2.36
CD46-218ENST00000496723 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 KIF13AQ9H1H9 1805 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 BLMP54132 1417 aaPredicted RBP0.29□□□□□ -2.36
CD46-218ENST00000496723 ABCA4P78363 2273 aa0.29□□□□□ -2.36
CD46-218ENST00000496723 ZNF142P52746 1687 aaPredicted RBP0.28□□□□□ -2.36
CD46-218ENST00000496723 TRBV10-1A0A0K0K1A3 114 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 TCRAP04437 139 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 SLC25A5P05141 298 aaKnown RBP0.28□□□□□ -2.36
CD46-218ENST00000496723 RPS28P62857 69 aaKnown RBP0.28□□□□□ -2.36
CD46-218ENST00000496723 SPINK6Q6UWN8 80 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 TMEM14BQ9NUH8 114 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 CALML5Q9NZT1 146 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 GINS2Q9Y248 185 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 NDUFAF1Q9Y375 327 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 PLXNA1Q9UIW2 1896 aa0.28□□□□□ -2.36
CD46-218ENST00000496723 MYO7AQ13402 2215 aa0.28□□□□□ -2.37
CD46-218ENST00000496723 GNG14A0A1W2PPG7 69 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 APOC1P02654 83 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 CCKP06307 115 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 PAEPP09466 180 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 KRTAP2-3P0C7H8 128 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 PLGLB1Q02325 96 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 MAGOHBQ96A72 148 aaKnown RBP0.27□□□□□ -2.37
CD46-218ENST00000496723 VPS25Q9BRG1 176 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 KRTAP2-4Q9BYR9 128 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 KRTAP2-1Q9BYU5 128 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 SLC35B3Q9H1N7 401 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 BDP1A6H8Y1 2624 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 MAST4O15021 2626 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 CDK5RAP2Q96SN8 1893 aa0.27□□□□□ -2.37
CD46-218ENST00000496723 CACNA1HO95180 2353 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 TRAV36DV7A0A075B6V5 113 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 A0A1B0GX51 115 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 H0YJX3 145 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 PPP1R1CQ8WVI7 109 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 PPDPFLQ8WWR9 84 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 DSCR8Q96T75 97 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 SPANXA1Q9NS26 97 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 SPANXCQ9NY87 97 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 ARHGAP31Q2M1Z3 1444 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 TNS1Q9HBL0 1735 aaKnown RBP0.26□□□□□ -2.37
CD46-218ENST00000496723 CASZ1Q86V15 1759 aa0.26□□□□□ -2.37
CD46-218ENST00000496723 TPRP12270 2363 aaKnown RBP0.25□□□□□ -2.37
CD46-218ENST00000496723 SYNE2Q8WXH0 6885 aaKnown RBP0.25□□□□□ -2.37
CD46-218ENST00000496723 F5P12259 2224 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 PARP14Q460N5 1801 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 KDM6BO15054 1643 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 CCDC171Q6TFL3 1326 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 TRAV17A0A0B4J275 112 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 TEX49A0A1B0GTD5 131 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 SMIM24O75264 130 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 CD3DP04234 171 aa0.25□□□□□ -2.37
CD46-218ENST00000496723 AKR1D1P51857 326 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms