RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 GIPP09681 153 aaPredicted RBP4.2□□□□□ -1.74
CHD6-209ENST00000482596 SULT1A3P0DMM9 295 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 SULT1A4P0DMN0 295 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 DEFB130BP0DP73 79 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 DEFB130AP0DP74 79 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 RNASE2P10153 161 aaKnown RBP4.2□□□□□ -1.74
CHD6-209ENST00000482596 OPRK1P41145 380 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 TCL1AP56279 114 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 SUPT4H1P63272 117 aaKnown RBP4.2□□□□□ -1.74
CHD6-209ENST00000482596 PAFAH1B2P68402 229 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 RIGQ13278 110 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 OR5I1Q13606 314 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 WFDC2Q14508 124 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 ACOT6Q3I5F7 207 aaPredicted RBP4.2□□□□□ -1.74
CHD6-209ENST00000482596 FAM78BQ5VT40 261 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 LYZL2Q7Z4W2 148 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 SMIM20Q8N5G0 67 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 GATD1Q8NB37 220 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 TM2D2Q9BX73 214 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 MS4A6AQ9H2W1 248 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 MSRB1Q9NZV6 116 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 Q9UF83 564 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 SHPKQ9UHJ6 478 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
CHD6-209ENST00000482596 TRAV30A0A087WSZ9 112 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 TRAV14DV4A0A0A6YYC5 116 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 TGIF2-C20orf24A0A0A6YYL0 155 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 A0A0J9YY99 117 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 DUXBA0A1W2PPF3 345 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 A0A1W2PS18 150 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 CEBPZOSA8MTT3 80 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 H0YIZ8 118 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 SFT2D2O95562 160 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 IGHV3-48P01763 117 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 RPL12P30050 165 aaKnown RBP4.19□□□□□ -1.74
CHD6-209ENST00000482596 LINC01547P58512 204 aaPredicted RBP4.19□□□□□ -1.74
CHD6-209ENST00000482596 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
CHD6-209ENST00000482596 ARL16Q0P5N6 197 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 FCN2Q15485 313 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 C4orf26Q17RF5 130 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 C2orf83Q53S99 150 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 NMSQ5H8A3 153 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 EIF4E3Q8N5X7 224 aaKnown RBP4.19□□□□□ -1.74
CHD6-209ENST00000482596 OR4X1Q8NH49 305 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 OR1S1Q8NH92 325 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 RASL10AQ92737 203 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 BTF3L4Q96K17 158 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 SIGMAR1Q99720 223 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 GINS3Q9BRX5 216 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 PAXXQ9BUH6 204 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 RHPN1-AS1Q9BWJ2 59 aa4.19□□□□□ -1.74
CHD6-209ENST00000482596 IGHV7-4-1A0A0J9YVY3 117 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 RHODO00212 210 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 PDE6DO43924 150 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 NDUFB6O95139 128 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 CRYGDP07320 174 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 SLC25A4P12235 298 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 SLC25A6P12236 298 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 FXYD7P58549 80 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 PPP1R1AQ13522 171 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 CNPY1Q3B7I2 92 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 GNPNAT1Q96EK6 184 aaPredicted RBP4.18□□□□□ -1.74
CHD6-209ENST00000482596 ZNF414Q96IQ9 312 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 RBKSQ9H477 322 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 U3KQ87 197 aa4.18□□□□□ -1.74
CHD6-209ENST00000482596 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.17□□□□□ -1.74
CHD6-209ENST00000482596 LYRM9A8MSI8 78 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 DNASE2O00115 360 aaPredicted RBP4.17□□□□□ -1.74
CHD6-209ENST00000482596 SLC17A3O00476 420 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 PSCAO43653 123 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 PITX3O75364 302 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 NXPH4O95158 308 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 PRM2P04554 102 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 ATP5G1P05496 136 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 ZNF688P0C7X2 276 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 IL7P13232 177 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 NPPCP23582 126 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 ATP5G3P48201 142 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 RPS20P60866 119 aaKnown RBP4.17□□□□□ -1.74
CHD6-209ENST00000482596 LINC00299Q6ZSB3 139 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 RXFP4Q8TDU9 374 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 NARS2Q96I59 477 aaKnown RBP4.17□□□□□ -1.74
CHD6-209ENST00000482596 C14orf144Q96I85 54 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 C1QTNF4Q9BXJ3 329 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 KLF12Q9Y4X4 402 aa4.17□□□□□ -1.74
CHD6-209ENST00000482596 SYNGR2O43760 224 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 IGKV1-17P01599 117 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 OR5AL1P0C617 328 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 IGLC1P0CG04 106 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 OR10J1P30954 320 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 RND2P52198 227 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 YPEL3P61236 119 aaPredicted RBP4.16□□□□□ -1.74
CHD6-209ENST00000482596 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
CHD6-209ENST00000482596 DNLZQ5SXM8 178 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 TMEM78Q5T7P6 136 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 PRSS54Q6PEW0 395 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 OR4B1Q8NGF8 309 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 OR10G9Q8NGN4 311 aa4.16□□□□□ -1.74
CHD6-209ENST00000482596 S100ZQ8WXG8 99 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms