RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 ZNF80P51504 273 aaPredicted RBP12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 LYZL1Q6UWQ5 148 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGF1P05019 195 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 HERV-K104P63124 156 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 BOD1L2Q8IYS8 172 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 TMSB15BA0A087X1C1 80 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 MSMBP08118 114 aa12.47□□□□□ -0.41
PIKFYVE-206ENST00000443896 IGKV2D-26A0A0A0MRZ7 120 aa12.46□□□□□ -0.41
PIKFYVE-206ENST00000443896 PRAC2D3DTV9 90 aa12.46□□□□□ -0.41
PIKFYVE-206ENST00000443896 TRGV3P03979 118 aa12.46□□□□□ -0.42
PIKFYVE-206ENST00000443896 SRSF2Q01130 221 aaKnown RBP12.46□□□□□ -0.42
PIKFYVE-206ENST00000443896 RNF182Q8N6D2 247 aa12.46□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGHV3OR16-13A0A075B7E8 117 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGHV3-74A0A0B4J1X5 117 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 A6NDX4 124 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 ERCC8Q13216 396 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 BRI3O95415 125 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 ZNF575Q86XF7 245 aa12.45□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGHG2P01859 326 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 SPATA25Q9BR10 227 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 CACNA1BQ00975 2339 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 SMKR1H3BMG3 65 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 H3BUX3 64 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 LY6EQ16553 131 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 MRPL53Q96EL3 112 aaKnown RBP12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 PSMG3-AS1Q96PY0 264 aa12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 MRPL16Q9NX20 251 aaKnown RBP12.44□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGHV3-49A0A0A0MS15 119 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 TMEM213A2RRL7 107 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 PTH2Q96A98 100 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 TGFAP01135 160 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGLC6P0CF74 106 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 DOPEY1Q5JWR5 2465 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 H3BUA1 57 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 ARL3P36405 182 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 C8orf86Q6ZUL3 223 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 ZNF479Q96JC4 524 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 UFC1Q9Y3C8 167 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 CELSR1Q9NYQ6 3014 aa12.43□□□□□ -0.42
PIKFYVE-206ENST00000443896 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 APOMO95445 188 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 FAM104BQ5XKR9 115 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 GTSCR1Q86UQ5 136 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 SMIM20Q8N5G0 67 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 U3KQK5 164 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 SPTAN1Q13813 2472 aaKnown RBP12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 GAGE13Q4V321 117 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 HIF1ANQ9NWT6 349 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 B4DSR2 109 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 TCTEX1D4Q5JR98 221 aa12.42□□□□□ -0.42
PIKFYVE-206ENST00000443896 A0A096LNJ9 63 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 DSCR9P59020 149 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 OR4X2Q8NGF9 303 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 USMG5Q96IX5 58 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 ANAPC13Q9BS18 74 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 AGPAT4-IT1Q9H0P7 198 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 LINC01559Q495D7 138 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 IL17RELQ6ZVW7 336 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 ZNF418Q8TF45 676 aaPredicted RBP12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 CHAC1Q9BUX1 264 aa12.41□□□□□ -0.42
PIKFYVE-206ENST00000443896 XGP55808 180 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 AMN1Q8IY45 258 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 D6R8Y8 96 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 AVPP01185 164 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 TRBV12-3P01733 135 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 ORM1P02763 201 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 OR9G4Q8NGQ1 327 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 CNFNQ9BYD5 112 aa12.4□□□□□ -0.42
PIKFYVE-206ENST00000443896 NDUFA4O00483 81 aa12.4□□□□□ -0.43
PIKFYVE-206ENST00000443896 FHL3Q13643 280 aa12.4□□□□□ -0.43
PIKFYVE-206ENST00000443896 BLCAPP62952 87 aa12.39□□□□□ -0.43
PIKFYVE-206ENST00000443896 NRGNQ92686 78 aa12.39□□□□□ -0.43
PIKFYVE-206ENST00000443896 IGLL5B9A064 214 aa12.39□□□□□ -0.43
PIKFYVE-206ENST00000443896 UNQ9165/PRO28630Q6UXU0 137 aa12.39□□□□□ -0.43
PIKFYVE-206ENST00000443896 FOXI2Q6ZQN5 318 aa12.39□□□□□ -0.43
PIKFYVE-206ENST00000443896 C9orf47Q6ZRZ4 202 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 TRBV20-1A0A075B6N2 111 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 F8W1H4 67 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 TWIST1Q15672 202 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 TMEM78Q5T7P6 136 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 SIGLEC8Q9NYZ4 499 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 Q6ZS46 218 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 KLK15Q9H2R5 256 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 FLNCQ14315 2725 aa12.38□□□□□ -0.43
PIKFYVE-206ENST00000443896 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 C3orf56Q8N813 242 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 PRELID3AQ96N28 172 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 USP9XQ93008 2570 aaPredicted RBP12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 SLC25A16P16260 332 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 C9orf139Q6ZV77 190 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
PIKFYVE-206ENST00000443896 PRSS1P07477 247 aa12.36□□□□□ -0.43
PIKFYVE-206ENST00000443896 IFI27L1Q96BM0 104 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms