RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 LRRIQ1Q96JM4 1722 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 CCDC88AQ3V6T2 1871 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 TRAV12-1A0A0B4J245 112 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 E7EUB6 86 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 LYRM1O43325 122 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 PROSCO94903 275 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 TPT1P13693 172 aaKnown RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 HIST1H1BP16401 226 aaKnown RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 DSCR4P56555 118 aaPredicted RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 SNRPD3P62318 126 aaKnown RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 ATOH7Q8N100 152 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 LINC00471Q8N535 108 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 OR2T35Q8NGX2 323 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 PSMF1Q92530 271 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 CIB3Q96Q77 187 aaPredicted RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 SNRNP25Q9BV90 132 aaKnown RBP2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 MPC1Q9Y5U8 109 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 USP32Q8NFA0 1604 aa2.59□□□□□ -1.99
TM9SF3-202ENST00000443638 LMTK2Q8IWU2 1503 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 PTPN23Q9H3S7 1636 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 TRAV30A0A087WSZ9 112 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 hDV103S1A0JD37 113 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 C2orf70A6NJV1 201 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 PYYP10082 97 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 HIST1H1DP16402 221 aaKnown RBP2.58□□□□□ -2
TM9SF3-202ENST00000443638 BTG2P78543 158 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 PDE6HQ13956 83 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 Q1T7F1 81 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 KRTAP13-3Q3SY46 172 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 GTF2H5Q6ZYL4 71 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 LINC00311Q8N616 119 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 COL4A2P08572 1712 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 NRAPQ86VF7 1730 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 ABCC5O15440 1437 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 ADGRL2O95490 1459 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 PLEKHH2Q8IVE3 1493 aa2.58□□□□□ -2
TM9SF3-202ENST00000443638 PHRF1Q9P1Y6 1649 aaKnown RBP2.57□□□□□ -2
TM9SF3-202ENST00000443638 CROCC2H7BZ55 1655 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 TRGV4A0A0C4DH28 118 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 CCL25O15444 150 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 IGKV1-17P01599 117 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 CRPP02741 224 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 SAA1P0DJI8 122 aaPredicted RBP2.57□□□□□ -2
TM9SF3-202ENST00000443638 TPPP2P59282 170 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 BLCAPP62952 87 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 CDK6Q00534 326 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 SNX29P2Q8IUI4 249 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 COPS9Q8WXC6 57 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 NABP2Q9BQ15 211 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 SPANXDQ9BXN6 97 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 FKBP11Q9NYL4 201 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 DNAJC15Q9Y5T4 150 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 PXDNLA1KZ92 1463 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 DIDO1Q9BTC0 2240 aaKnown RBP2.57□□□□□ -2
TM9SF3-202ENST00000443638 KCPQ6ZWJ8 1503 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 ADAMTS7Q9UKP4 1686 aa2.57□□□□□ -2
TM9SF3-202ENST00000443638 NWD2Q9ULI1 1742 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 A0A0C4DFX4 3053 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 IGKV1D-17A0A075B6S4 117 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 H3BRN7 92 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 CCDC179H3BU77 68 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 M0R129 80 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 M0R233 179 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 SLC25A4P12235 298 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 KRTAP10-8P60410 259 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 CLLU1Q5K131 121 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 KCNRGQ8N5I3 272 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 CLEC2BQ92478 149 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 DPH3Q96FX2 82 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 MRPL57Q9BQC6 102 aaKnown RBP2.56□□□□□ -2
TM9SF3-202ENST00000443638 SLC35B3Q9H1N7 401 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 SAR1AQ9NR31 198 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 TPRKBQ9Y3C4 175 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 CHCHD2Q9Y6H1 151 aaPredicted RBP2.56□□□□□ -2
TM9SF3-202ENST00000443638 PPIP5K1Q6PFW1 1433 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 COL1A1P02452 1464 aaPredicted RBP2.56□□□□□ -2
TM9SF3-202ENST00000443638 EHBP1L1Q8N3D4 1523 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 XRN1Q8IZH2 1706 aaKnown RBP2.56□□□□□ -2
TM9SF3-202ENST00000443638 NUMA1Q14980 2115 aa2.56□□□□□ -2
TM9SF3-202ENST00000443638 TRBV20-1A0A075B6N2 111 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 TRAV12-2A0A075B6T6 113 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 NCKAP5O14513 1909 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 YPEL1O60688 119 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 POLEQ07864 2286 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 ELOBQ15370 118 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 NCMAPQ5T1S8 102 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 LINC01545Q5VT33 79 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 KRTAP26-1Q6PEX3 210 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 RAB37Q96AX2 223 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 TTTY12Q9BZ98 90 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 METTL1Q9UBP6 276 aaKnown RBP2.55□□□□□ -2
TM9SF3-202ENST00000443638 LSM2Q9Y333 95 aaKnown RBP2.55□□□□□ -2
TM9SF3-202ENST00000443638 IER3IP1Q9Y5U9 82 aa2.55□□□□□ -2
TM9SF3-202ENST00000443638 MYO9BQ13459 2157 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 ATG2AQ2TAZ0 1938 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 ANAPC1Q9H1A4 1944 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 SBF2Q86WG5 1849 aa2.54□□□□□ -2
TM9SF3-202ENST00000443638 DUOX2Q9NRD8 1548 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms