RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FAM223AQ8IWN6 122 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 NRACQ8N912 160 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 MOB4Q9Y3A3 225 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 LINC00527Q9UJ94 153 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
SEMA3B-207ENST00000441915 ZC2HC1BQ5TFG8 222 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 Q6ZQT7 251 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 TMEM8BA6NDV4 472 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 GLMPQ8WWB7 406 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 HIGD1BQ9P298 99 aa12.6□□□□□ -0.39
SEMA3B-207ENST00000441915 H3BVH4 76 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 ARL3P36405 182 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 RPL24P83731 157 aaKnown RBP12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 SCGB2A2Q13296 93 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 A0A1W2PPM0 123 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 GTSCR1Q86UQ5 136 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 TMEM160Q9NX00 188 aa12.59□□□□□ -0.39
SEMA3B-207ENST00000441915 SRSF1Q07955 248 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEMA3B-207ENST00000441915 TTTY13Q9BZ97 58 aa12.58□□□□□ -0.4
SEMA3B-207ENST00000441915 TRAV40A0A0B4J280 105 aa12.58□□□□□ -0.4
SEMA3B-207ENST00000441915 GCSHP23434 173 aa12.58□□□□□ -0.4
SEMA3B-207ENST00000441915 TM4SF20Q53R12 229 aa12.58□□□□□ -0.4
SEMA3B-207ENST00000441915 IGHV3OR16-10A0A075B7F0 116 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 TEX48A0A1B0GUV7 120 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 PRR9Q5T870 116 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 ITLN2Q8WWU7 325 aaPredicted RBP12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 MRAP2Q96G30 205 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 LINC00477Q96M19 166 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 J3KRW8 73 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 C19orf54Q5BKX5 351 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 C20orf173Q96LM9 149 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 CHAC1Q9BUX1 264 aa12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 MRPL35Q9NZE8 188 aaKnown RBP12.57□□□□□ -0.4
SEMA3B-207ENST00000441915 SMIM13P0DJ93 91 aa12.56□□□□□ -0.4
SEMA3B-207ENST00000441915 CRIP2P52943 208 aaPredicted RBP12.56□□□□□ -0.4
SEMA3B-207ENST00000441915 TRBV25-1A0A075B6N4 114 aa12.56□□□□□ -0.4
SEMA3B-207ENST00000441915 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
SEMA3B-207ENST00000441915 UNQ9165/PRO28630Q6UXU0 137 aa12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 TRAV21A0A0B4J279 112 aa12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 NDUFA4O00483 81 aa12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 IGF1P05019 195 aa12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 FABP2P12104 132 aa12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
SEMA3B-207ENST00000441915 A0A087WX48 190 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 HLA-DRB4P13762 266 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 FXYD2P54710 66 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 HLA-DRB4X5D2U9 266 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 IGHV1-69DA0A0B4J2H0 117 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 M0R381 172 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 OVOL1O14753 267 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 IGHV1-69P01742 117 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 VPS13CQ709C8 3753 aa12.54□□□□□ -0.4
SEMA3B-207ENST00000441915 GAGE12HA6NDE8 117 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 TRBV12-3P01733 135 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 GPHB5Q86YW7 130 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 ZFAND2AQ8N6M9 145 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 PLNP26678 52 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 LY6DQ14210 128 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 TSSC4Q9Y5U2 329 aaPredicted RBP12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 CKS1BP61024 79 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 ORMDL2Q53FV1 153 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 SAMD5Q5TGI4 173 aa12.53□□□□□ -0.4
SEMA3B-207ENST00000441915 ASIPP42127 132 aa12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 RPL11P62913 178 aaKnown RBP12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 IGHV4-39P01824 125 aa12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 SUMO2P61956 95 aaKnown RBP12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 DPH3P1Q9H4G8 78 aa12.52□□□□□ -0.41
SEMA3B-207ENST00000441915 SOCS3O14543 225 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 C19orf84I3L1E1 186 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 CEND1Q8N111 149 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 C20orf78Q9BR46 151 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 TM2D2Q9BX73 214 aa12.51□□□□□ -0.41
SEMA3B-207ENST00000441915 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 F8VRH5 84 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 C14orf178Q8N769 122 aaPredicted RBP12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 TRAV12-1A0A0B4J245 112 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 H7C1H1 209 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 IGHV3-11P01762 117 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 LY6EQ16553 131 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 RASL10AQ92737 203 aa12.5□□□□□ -0.41
SEMA3B-207ENST00000441915 H3BUA1 57 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 SPRY2O43597 315 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 SLC25A16P16260 332 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 CRYBA4P53673 196 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 DEFB1P60022 68 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 ANXA2RQ3ZCQ2 193 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 SCGB3A1Q96QR1 104 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 KLK15Q9H2R5 256 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 NHP2Q9NX24 153 aaKnown RBP12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 ABCA2Q9BZC7 2435 aa12.49□□□□□ -0.41
SEMA3B-207ENST00000441915 J3QR89 54 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms